Pairwise Alignments

Query, 219 a.a., glutamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  124 bits (311), Expect = 1e-33
 Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 9   LWVSLPQLGKGAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPV 68
           LW  L  L      T+ +S ++     + G L   LR    R  N  + +Y++LF+  P+
Sbjct: 6   LWDILRNLLMALRWTVVLSLIAFVGGGIVGALLLFLRLRGGRFANRAVGLYVQLFQGTPL 65

Query: 69  LVWLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIG 128
           L+ L+L +FG+ +F G+ + ++  A + L+L+ ++ + E+ RG + S+P+GQ EA  S+ 
Sbjct: 66  LMQLFLAYFGIALF-GIDVSAWTAASVALTLYTSAFLAEIWRGCVASIPKGQWEASGSLA 124

Query: 129 LSDPQLYGYVLLPQALKRMTPPTLNVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESV 188
           LS  +   +V+LPQA+K    PT+    ++IK ++LA +IG V++ K G  I   T++  
Sbjct: 125 LSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSMISNATFKPF 184

Query: 189 LIYGVLFLFFFFICYPLSAASKVLERR 215
           +++  + L +F +C+P+S  +K LER+
Sbjct: 185 VVFSCVALLYFVLCFPVSLYAKTLERK 211