Pairwise Alignments

Query, 219 a.a., glutamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  123 bits (309), Expect = 3e-33
 Identities = 69/206 (33%), Positives = 114/206 (55%)

Query: 8   LLWVSLPQLGKGAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIP 67
           +LW     L  G A TL  + + +      G++ G+ R   N  I+A +R Y+E+FR  P
Sbjct: 51  VLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIEVFRCTP 110

Query: 68  VLVWLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSI 127
           VLV L   ++ LP+  GL + +   A L LSL+G +   E+VRG + S+  GQ EA  ++
Sbjct: 111 VLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQVEAARAL 170

Query: 128 GLSDPQLYGYVLLPQALKRMTPPTLNVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYES 187
           G++  QL   ++LPQA KRM PP ++     +K +SL  ++ V D++  GQ I   TY  
Sbjct: 171 GMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIAHETYRP 230

Query: 188 VLIYGVLFLFFFFICYPLSAASKVLE 213
           + +Y  + + +F +  P++  +K +E
Sbjct: 231 LELYTFIAVAYFAVLLPVTIWAKRME 256