Pairwise Alignments

Query, 219 a.a., glutamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  120 bits (300), Expect = 3e-32
 Identities = 64/193 (33%), Positives = 115/193 (59%), Gaps = 1/193 (0%)

Query: 23  TLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVLVWLYLLFFGLPIF 82
           TL +S ++     VGG    + R      +     VY+E  + IP+L+ L++++FGL ++
Sbjct: 21  TLVLSAIAFVLGAVGGFGLMLARISPRPWLRWFAVVYIECIQGIPLLILLFIVYFGLSVY 80

Query: 83  FGLSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGLSDPQLYGYVLLPQ 142
            GLSLPS   A L + ++ ++ +G++ RG + ++P+ Q EA   + LS  Q    V++PQ
Sbjct: 81  -GLSLPSLVAAGLAMMIYVSAYLGDIWRGCIEAMPKPQWEASECLALSRWQTLRLVIIPQ 139

Query: 143 ALKRMTPPTLNVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLIYGVLFLFFFFIC 202
           A++   PPT+    +IIK +SLA +IG V++ + GQ I    ++  L++ ++  F+F +C
Sbjct: 140 AVRLSLPPTVGFLVQIIKMTSLASVIGFVELTRAGQIINNTIFQPFLVFFLVGAFYFALC 199

Query: 203 YPLSAASKVLERR 215
           YPLS  S+ +E++
Sbjct: 200 YPLSRWSEAMEKK 212