Pairwise Alignments

Query, 221 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  135 bits (339), Expect = 1e-36
 Identities = 75/193 (38%), Positives = 118/193 (61%), Gaps = 1/193 (0%)

Query: 22  TLQVGLIAIATSLLVALINAALLVFRTPYLSRLVALYVELARNTPLLIQLFFVYFALPAL 81
           TL + +++    L++ L      +   P L  L  +YVEL R TPLL+Q+F  YF +  +
Sbjct: 124 TLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFFIGTV 183

Query: 82  GFNISGFWAAIITLTFLGGAYLTEVLRAGVEAVPLAQVESGKSIGLSDWQLLRHVILPQA 141
             N+S  +A I  L+   GAY+ E++RAGV+++   Q E+ +S+GLS  Q +RHV+LPQA
Sbjct: 184 -LNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMRHVVLPQA 242

Query: 142 GILSLPALFANFIFLLKETTVVSAVAVPEILYTTKSYIALYYKTYEMLAVLTLICVLLFL 201
               LP L   FI L+K+T++VS +A+ E+L + +  I   +  +E+L  +  + +L+ L
Sbjct: 243 FKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINL 302

Query: 202 PLSLLLSRLERRL 214
           PLS + SRLERRL
Sbjct: 303 PLSKMASRLERRL 315