Pairwise Alignments

Query, 221 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 222 a.a., ABC transporter membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 2e-31
 Identities = 65/200 (32%), Positives = 116/200 (58%), Gaps = 5/200 (2%)

Query: 2   TFDFAFILSTLPAFLKAVGVTLQVGLIAIATSLLVALINAALLVFRTPYLSRL-VALYVE 60
           +F+F  +      F+  V  TL + + A A  L++ +I A +L    P  +R+ V  Y+E
Sbjct: 3   SFNFRPLWRYEDQFIDGVLTTLLLTVSATAIGLIIGIIGAVVLR-SGPKPARIGVRAYIE 61

Query: 61  LARNTPLLIQLFFVYFALPALGFNISGFWAAIITLTFLGGAYLTEVLRAGVEAVPLAQVE 120
           + RNTP L+Q+F ++F LP +G   S   A+I+ L+   GAY +E+LR+G+ ++P +Q+E
Sbjct: 62  IIRNTPALLQIFIIFFVLPTIGLKFSPIHASIVALSIYFGAYASEILRSGLNSIPPSQIE 121

Query: 121 SGKSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKSYIA 180
           +G  +GL+ WQ+L  ++LP A     P++ + F+ LL  T++ S V+  E+ +      +
Sbjct: 122 AGVCLGLTRWQVLSRIVLPPAIRNIYPSMTSQFVLLLLGTSIASQVSTDELFHAAGFIDS 181

Query: 181 LYYKTYEMLAVLTLICVLLF 200
             Y+++E+ A   L C + F
Sbjct: 182 RTYRSFEVYA---LTCGIYF 198