Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 372 a.a., Beta sliding clamp from Xanthobacter sp. DMC5

 Score =  284 bits (726), Expect = 3e-81
 Identities = 155/373 (41%), Positives = 224/373 (60%), Gaps = 7/373 (1%)

Query: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60
           M  T++R  LLK L  V  VVERR T+P+L+NVL+      L L  TDL++E+V  V  E
Sbjct: 1   MKVTVERAELLKSLSHVHRVVERRNTIPILANVLIKAAKGTLELKATDLDLEVVESVPAE 60

Query: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKV--DEAKLVVKAGRSRFTLSTLPANDFPT 118
              + G  TVPA  L DI + LP+ A + ++   +   L V+A R+RF+L TLP  DFP 
Sbjct: 61  T-GQAGATTVPAHVLYDIVRKLPDGAQVQLEAGGERGTLTVRASRARFSLQTLPEADFPD 119

Query: 119 VEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEG----IIRAVATDG 174
           +  G  S T  ++ ++ RRL+++T FA++ ++ RYYLNG+ L V+E     ++RAVATDG
Sbjct: 120 LAAGEFSHTFKVKGAEFRRLVDKTQFAISTEETRYYLNGIYLHVTEAGGKAMLRAVATDG 179

Query: 175 HRLAMCSMRADIGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEFTFT 234
           HRLA   + A  G      VIVPRK + E+ +LL + E  V+I L    IR   G    T
Sbjct: 180 HRLAQAELEAPAGSQGLPGVIVPRKTVAEIQKLLEDKEAEVTISLSATKIRVQVGAIVLT 239

Query: 235 SKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQ 294
           SKL+DG FPDY RV+P+G DK ++ D+     A  R + +S+E+ R ++L L +G++ + 
Sbjct: 240 SKLIDGTFPDYGRVIPQGNDKTLIVDKDEFAAAVDRVSTVSSERGRAVKLSLGDGKMVLS 299

Query: 295 ANNPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESD 354
             NP+   A EE+ VDY    L+IGFN  YLLD+   +  +   L L+D  S  LV++S 
Sbjct: 300 VTNPDSGSATEELEVDYTAEPLDIGFNSRYLLDITSQLEGDTAELKLADPGSPTLVRDST 359

Query: 355 NDDSAYVVMPMRL 367
             D+ YV+MPMR+
Sbjct: 360 KTDALYVLMPMRV 372