Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 368 a.a., DNA polymerase III beta subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  312 bits (800), Expect = 8e-90
 Identities = 166/362 (45%), Positives = 237/362 (65%), Gaps = 2/362 (0%)

Query: 7   REALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEPAEPG 66
           ++ +L  LQ VAG+VERR TLP+L+NVL+   G QL LT +DLE+++    +L       
Sbjct: 8   QDKVLAALQSVAGIVERRHTLPILANVLIRKTGGQLQLTTSDLEIQIRTTAELGGDEGNF 67

Query: 67  EITVPARKLMDICKSLPNDALIDIKVDEAKLVVKAGRSRFTLSTLPANDFPTVEEGPG-S 125
             T+ ARKL+DI +++P+D  + ++   +KLV+K G+SRFTL +LPA DFP V+E     
Sbjct: 68  TTTIGARKLIDILRTMPSDQTVSLESSASKLVLKGGKSRFTLQSLPAEDFPLVQEAANFG 127

Query: 126 LTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRLAMCSMRAD 185
              S+ Q  L+ L+ + SFAMA  D+RYYLNG+L       +  VATDGHRLA  S   D
Sbjct: 128 PVFSVPQKTLKDLLSQVSFAMAVHDIRYYLNGILFVAEGKQLSLVATDGHRLAFSSATLD 187

Query: 186 IGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEFTFTSKLVDGKFPDY 245
           +  P R +VI+PRK +LE+ RLL++ EG + +    +  + + G   F +KLV+GKFPDY
Sbjct: 188 VEVP-RQEVILPRKTVLEMQRLLSDAEGAIEMQFANNQAKFSFGGMEFVTKLVEGKFPDY 246

Query: 246 ERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQEEAEE 305
            RV+PK     V   R  L  +  RTAIL++EK++G+RL +  G L+I +NN EQEEA++
Sbjct: 247 NRVIPKNHKNTVTLGRAPLLASLQRTAILTSEKFKGVRLNIEPGTLRIASNNAEQEEAQD 306

Query: 306 EVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPM 365
           E+ +DY G ++EIGFNV+YL+D L  M  + V+L L+DSNSSAL+   +N    YVVMPM
Sbjct: 307 ELDIDYGGDAIEIGFNVTYLIDALSNMDQDMVKLDLADSNSSALLTIPENASFKYVVMPM 366

Query: 366 RL 367
           R+
Sbjct: 367 RI 368



 Score = 33.9 bits (76), Expect = 7e-06
 Identities = 33/177 (18%), Positives = 74/177 (41%), Gaps = 8/177 (4%)

Query: 3   FTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEP 62
           F++ ++ L   L  V+  +        L+ +L V EG+QLSL  TD          L+  
Sbjct: 130 FSVPQKTLKDLLSQVSFAMAVHDIRYYLNGILFVAEGKQLSLVATDGHRLAFSSATLDVE 189

Query: 63  AEPGEITVPARKLMDICKSLPN-DALIDIKVDEAKLVVKAGRSRFTLSTLPAN--DFPTV 119
               E+ +P + ++++ + L + +  I+++    +     G   F    +     D+  V
Sbjct: 190 VPRQEVILPRKTVLEMQRLLSDAEGAIEMQFANNQAKFSFGGMEFVTKLVEGKFPDYNRV 249

Query: 120 EEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHR 176
                  T +L ++ L   ++RT+   +++       G+ L +  G +R  + +  +
Sbjct: 250 IPKNHKNTVTLGRAPLLASLQRTAILTSEK-----FKGVRLNIEPGTLRIASNNAEQ 301