Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 370 a.a., DNA polymerase III beta subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  274 bits (700), Expect = 3e-78
 Identities = 147/371 (39%), Positives = 222/371 (59%), Gaps = 5/371 (1%)

Query: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQ-QLSLTGTDLEVELVGRVQL 59
           M  TI+R  LLK L  V  VVERR T+P+LSNVL+       + L  TDL++++V  V  
Sbjct: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQVVESVSA 60

Query: 60  EEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEAKLVVKAGRSRFTLSTLPANDFPTV 119
           +   + G  T+ A  L DI + LP  + + ++  + K++++AGR+RF LSTLP +DFP +
Sbjct: 61  QVE-QAGATTISAHTLFDIARKLPEGSQVSLQAADGKMLIQAGRARFNLSTLPRDDFPVI 119

Query: 120 EEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEG---IIRAVATDGHR 176
            EG    +  L    L+++I++T FA++ ++ RYYLNG+   VS+    +++A ATDGHR
Sbjct: 120 AEGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDEGSPVLKAAATDGHR 179

Query: 177 LAMCSMRADIGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEFTFTSK 236
           LA  ++    G      +I+PRK I EL +LL E EG+V + L    IR   G    TSK
Sbjct: 180 LARVTVPRPDGADGMPGIIIPRKCIAELRKLLDEVEGSVQVSLSASKIRFGLGSAILTSK 239

Query: 237 LVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQAN 296
           L+DG FPDY RV+P   DKL+  D ++  E   R A ++ EK R +++ L   ++ +   
Sbjct: 240 LIDGTFPDYSRVIPTANDKLLKIDPRSFEEGVDRVATIATEKTRAVKMSLDKDKITLSVT 299

Query: 297 NPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDND 356
           +PE   A EEV   + G   +IGFN  YLLD+LG + T+ V L L+D+ +  L++E+D  
Sbjct: 300 SPENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDTDIVELHLADAAAPTLIRENDRS 359

Query: 357 DSAYVVMPMRL 367
            + YV+MPMR+
Sbjct: 360 PALYVLMPMRV 370