Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 367 a.a., Beta sliding clamp from Methylophilus sp. DMC18

 Score =  317 bits (813), Expect = 2e-91
 Identities = 169/374 (45%), Positives = 251/374 (67%), Gaps = 14/374 (3%)

Query: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60
           M   I RE LLKPL  V G+VERR TLP+LSN+L+ ++  ++ LT TDLE+++  +V   
Sbjct: 1   MQIKINREVLLKPLNSVTGIVERRHTLPILSNLLVNIKQDEMHLTATDLEMQISLKVH-- 58

Query: 61  EPAEPGEI--TVPARKLMDICKSLPNDALIDIKVDEAKLVVKAGRSRFTLSTLPANDFPT 118
                GE+  T+ A+KL+DIC+SLP+   I++   + ++ +KAG+SRF L TLPA D+P 
Sbjct: 59  -GGIEGELSTTISAKKLLDICRSLPDSTTIEMNNQDNRITLKAGKSRFNLQTLPAADYPL 117

Query: 119 VEEGPG-SLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRL 177
           + +  G +++ SL QS+ +RL+++  FAMAQQD+RYYLNG+LLEV+   +  V TDGHRL
Sbjct: 118 MSKASGQNISFSLAQSEFKRLLKQVEFAMAQQDIRYYLNGLLLEVNGNQLHVVGTDGHRL 177

Query: 178 AMCSMRADIGQP-DRHQVIVPRKGILELARLLTEPEGN---VSIVLGQHHIRATTGEFTF 233
           +  +    + Q  ++ +VI+PRK +LEL +LL E   +   + ++ GQ  +    G+   
Sbjct: 178 SYTN--TTLAQSFEKTEVILPRKTVLELTKLLDEQSDSPVVIEVLNGQ--VSFEFGDIQL 233

Query: 234 TSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKI 293
            SK++DGKFPDY RV+P G     L +R  +  A  R +ILSNEKYR IR+ + N QLK+
Sbjct: 234 ISKVIDGKFPDYNRVIPNGHQNTFLVNRTQILSALQRASILSNEKYRSIRMVITNNQLKL 293

Query: 294 QANNPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQES 353
            + N EQEEAEEE+ +DY+  +L+IGFNV+YL+DVL  ++ EQ++   +D+NSS L+  S
Sbjct: 294 ISTNTEQEEAEEELDIDYSNAALDIGFNVTYLIDVLNNLSDEQIQFAFADANSSCLITAS 353

Query: 354 DNDDSAYVVMPMRL 367
            + +  YVVMPMR+
Sbjct: 354 SDANYKYVVMPMRI 367