Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 372 a.a., DNA polymerase III, beta chain from Agrobacterium fabrum C58

 Score =  280 bits (717), Expect = 3e-80
 Identities = 156/376 (41%), Positives = 222/376 (59%), Gaps = 13/376 (3%)

Query: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60
           M  T++R  LLK L  V  VVERR T+P+LSNVLL   G  L +  TDL++E+       
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRASGANLDMKATDLDLEITEAT--- 57

Query: 61  EPA---EPGEITVPARKLMDICKSLPN--DALIDIKVDEAKLVVKAGRSRFTLSTLPAND 115
            PA   + G  TVPA  L +I + LP+  + L+    D + + V +GRS+F+L  LP  D
Sbjct: 58  -PAMVEQAGATTVPAHLLYEIVRKLPDGSEVLLATNPDGSSMTVASGRSKFSLQCLPEAD 116

Query: 116 FPTVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGI----IRAVA 171
           FP +  G  S T  L+ + L+ LI+RT FA++ ++ RYYLNG+     E      +RAVA
Sbjct: 117 FPDLTAGTFSHTFKLKAADLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGELKLRAVA 176

Query: 172 TDGHRLAMCSMRADIGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEF 231
           TDGHRLA   + A  G      +I+PRK + EL +L+  PE  V++ +    IR   G  
Sbjct: 177 TDGHRLARADVDAPSGSEGMPGIIIPRKTVGELQKLMDNPELEVTVEVSDAKIRLAIGSV 236

Query: 232 TFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQL 291
             TSKL+DG FPDY+RV+P G DK +  D Q    A  R + +S+E+ R ++L L +GQL
Sbjct: 237 VLTSKLIDGTFPDYQRVIPTGNDKEMRVDCQTFARAVDRVSTISSERGRAVKLALTDGQL 296

Query: 292 KIQANNPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQ 351
            +  NNP+   A EEV V Y+  S+EIGFN  YLLD+   ++ E    +L+D+ S  LV+
Sbjct: 297 TLTVNNPDSGSATEEVAVGYDNDSMEIGFNAKYLLDITSQLSGEDAIFLLADAGSPTLVR 356

Query: 352 ESDNDDSAYVVMPMRL 367
           ++  DD+ YV+MPMR+
Sbjct: 357 DTAGDDALYVLMPMRV 372