Pairwise Alignments

Query, 308 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 276 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  430 bits (1105), Expect = e-125
 Identities = 217/272 (79%), Positives = 238/272 (87%)

Query: 1   MSLHETYGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREELESLAPRALPVLIRGETG 60
           M+    +GQPLLTFP+ +KSPLSIRAKALVF+DPRS+QLRE+LE LAP+ LPVLIRGETG
Sbjct: 1   MTFQNPFGQPLLTFPELDKSPLSIRAKALVFIDPRSQQLREDLERLAPQPLPVLIRGETG 60

Query: 61  SGKELLARHIHRGSDRTGLFVSVNCGAISPTYADAELFGYAAGSHSGTASSRAGWFGSAN 120
           +GKELLAR IHR SDR GLFVSVNC AISPTYADAELFGY+AGSH GTASSRAGWFGSA+
Sbjct: 61  TGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGSHGGTASSRAGWFGSAS 120

Query: 121 GGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVRLVAATSIDLAQAVAAGK 180
           GGTLYLDEI DLPL IQ KLLAALEN EVTRVGA QP PVDVRLVAATSIDLA+ V AG+
Sbjct: 121 GGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSIDLARVVRAGR 180

Query: 181 FHERLFHYLSEGRLDLPALRERVGDILSLAEYFLGIYSQRLDLPVPLISDAAQRVLEHHS 240
           F+ERL+ YL EG L+LP LRER GDIL LAEYF GIYS RL  PVPL+S+AAQRVLE H 
Sbjct: 181 FNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQRPVPLVSEAAQRVLEGHF 240

Query: 241 WPGNTRELENVIHFALLVSSGDEILPEHLNLP 272
           WPGNTRELENVIHFALLV+ G+EILPE L+LP
Sbjct: 241 WPGNTRELENVIHFALLVNDGEEILPEDLDLP 272