Pairwise Alignments

Query, 401 a.a., CdaR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 389 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  312 bits (800), Expect = 9e-90
 Identities = 176/388 (45%), Positives = 240/388 (61%), Gaps = 9/388 (2%)

Query: 17  MRLRAGETGLDNGVRWPYVAENSGIAEWVLGGELVFVTGINHPRDETNLLQLLEEACERQ 76
           M++RAG   L   VRWPYVAEN GIAEWV+GGELVFVTGINHPR E NLL L+E+     
Sbjct: 1   MQVRAGARNLQRRVRWPYVAENEGIAEWVMGGELVFVTGINHPRGEANLLSLVEDGDAVG 60

Query: 77  VAGLVVLTGPAYIQAIPQRLLDAAEAAGMPLIEQPYSLKMVLVTQAIGSALIQSEQLGRS 136
           +AG+V+LTG ++IQ+IP  ++  AE  G+PLIEQPY+LKMV+VT  IG+AL+Q  Q+ RS
Sbjct: 61  IAGMVILTGGSFIQSIPAPVVARAEQLGLPLIEQPYALKMVVVTHLIGTALVQMSQVRRS 120

Query: 137 RHDVLERLLTGDYQSLELLLHRATQLGMPLAGYWQVVQLQLEGNELLFAQGDAASVEAQL 196
           R+D+L +LLTGDY SL +   RA  L + L    +++ L+L G   LF +   A  E   
Sbjct: 121 RNDILGQLLTGDYPSLAIARQRAAHLQLALDKPRRLLALRLTGVNALFERQGLAHGERTW 180

Query: 197 ARQHDVISRRLRQFSAGLPVQGRAGQWTVLLPAPDAVAALTNRQQLAHWLNPLNLRL--- 253
                 +  +L  +      + R G  T  LP    V  L + Q L   L  L  +L   
Sbjct: 181 QATRQALEDQLEAW-----CRQRPGSVTAQLPGDLFVVLLADTQDLPETLGALYRQLQAA 235

Query: 254 -APLKLFIGLSAAAHPPAHLAQAQDEARQALAAARRFSERAGLCVYDELGVLKLLSGVRD 312
              L L++GLS+ A   AH  QA +EARQAL  A+      G C + ELGVL+LL G+ D
Sbjct: 236 TGELGLYMGLSSLADDCAHYRQALNEARQALDVAQHLRPANGYCNFSELGVLRLLQGIVD 295

Query: 313 RALLDQFLNERLGPLLRHDLHHGPNMMPTLEAWFHENGNLVAAAQRLAVHRNTLTHRVQR 372
           R+L+D F++  LGPL+     H   ++ TL+A   ENGN + AAQRL +HRNT+  R+QR
Sbjct: 296 RSLVDDFVSRTLGPLIAPGRKHAHALVHTLDALLMENGNGLKAAQRLGLHRNTINQRIQR 355

Query: 373 IEALCGLTLDNAYDRLDIGIALMIWRLS 400
           IE L G +LD+   R++  +A+++WR+S
Sbjct: 356 IEQLSGQSLDDPLFRMNASVAMLVWRMS 383