Pairwise Alignments

Query, 672 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score =  268 bits (686), Expect = 4e-76
 Identities = 186/586 (31%), Positives = 283/586 (48%), Gaps = 44/586 (7%)

Query: 28  GSEVLDQPFFIHIQVVSENPSLDLEALLHQPAYLAFGEADDG---LHGQVYAIGRDDPGR 84
           G E L + F   +Q+ S + ++DL  LL +P  +    AD G    HG V    ++    
Sbjct: 28  GGEELGRLFNYELQLTSLDANIDLNQLLGKPMSVGLQLADGGERHFHGIVARCSQNIDQG 87

Query: 85  RTTRYHLTLAPRLAYLAHRRDQRIFQQRSVPQIIAEVLEQHGI--LADAYAFELGPVVYP 142
           +   Y +TL P L  L+   D RIFQ  S+PQII +V    G     DA +       Y 
Sbjct: 88  QFASYQVTLRPWLWLLSRTSDCRIFQNLSIPQIIKQVFRDLGFSDFEDALSRP-----YR 142

Query: 143 PRTFCVQYAESDLHFIQRLCEEEGIHYHFRHSVDAHLLVFGDD---QTVFPRLPVQCYSA 199
              +CVQY E+   F+ RL E+EGI+Y FRH  D H+LV  D     T  P      Y  
Sbjct: 143 EWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQDRHVLVLADAYGAHTTVPGYASIPYYP 202

Query: 200 PGGPHADTPVIQRFDVRLGIRSQKTVRRDYDFEHPSVHLHDSAG-----AASTLPLEDYQ 254
                 +   +  + +   ++       DYDF+ PS  +   +       A   PL  Y 
Sbjct: 203 KDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRPSASIDVRSAMPRPHTAGDYPL--YD 260

Query: 255 YPAGFTAHTRGKQLARRSLE----LHQRDRYRALGKSDQPVLRSGHFLEIRDHPDPSCND 310
           YP  +     G+  AR  +E    LH++  +    +     L SGH   +        N 
Sbjct: 261 YPGTYVQSEDGEHYARTRIEALQTLHEQIEFNGNARG----LGSGHLFSLTGFSRQDQNR 316

Query: 311 LWLITSVRHEGYQPQVLEEATPATDVFQGYRNRFTATPWQAVHRPSLRHTKPTINGSQTA 370
            +LI   R+   Q  +       +  F+   +  T    Q   RP     +P + G QTA
Sbjct: 317 EYLIVGCRYYIVQESLESGGGSGSAQFE---SSLTCIDAQQSFRPLANTHRPIVKGPQTA 373

Query: 371 TVTGPAGEDVHCDVYGRVKVRFHWDRLDEADDKSSCWLRVASGWAGDGFGATMIPRVGME 430
            V GP GE++  D YGRVKV F+WDR D++++ SSCW+RV+  WAG  +G+  IPR+G E
Sbjct: 374 LVVGPKGEEIWTDQYGRVKVHFYWDRHDQSNENSSCWIRVSQSWAGKNWGSMQIPRIGQE 433

Query: 431 VLVTFLDGDPDRPLINGCLPNALHRPTYPLPLHKTRSVLRSSSSLGGEGS--NELYLEDR 488
           V+V+FL+GDPDRP+I G + NA     Y LP + T+S ++S SS GG  +  NE+ +ED+
Sbjct: 434 VIVSFLEGDPDRPIITGRVYNAEQTVPYDLPENATQSGMKSRSSKGGSPANFNEIRMEDK 493

Query: 489 RGEELVYLRAQRDLEQRIGHDSRLEVAGERQEVI-HGISTTHLKSEEHRQVTGDRKVLLK 547
           +G E +Y+ A+R+ +  +  D    V  +R + I H  + T         +  +R  ++K
Sbjct: 494 KGLEQLYIHAERNQDIVVEVDESHSVGHDRNKSIGHNETVT---------IGNNRLRIVK 544

Query: 548 ASDYLDVHGDSRTHVAQTLVIEAGQQLHLKSGASLV-IDAGAELSL 592
             D L V       ++Q+ VIE G+ L L  G S++ ++A  +++L
Sbjct: 545 QEDILSVGQKKTDSISQSYVIEVGENLRLVCGESILELNASGQINL 590