Pairwise Alignments

Query, 672 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

Subject, 681 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  249 bits (636), Expect = 3e-70
 Identities = 184/586 (31%), Positives = 272/586 (46%), Gaps = 39/586 (6%)

Query: 85  RTTRYHLTLAPRLAYLAHRRDQRIFQQRSVPQIIAEVLEQHGILADAYAFEL-GPVVYPP 143
           R   Y   + P L       D RIFQ ++V  I+++ L ++      + FE+     YPP
Sbjct: 109 RRALYEAVIEPWLTLATRTNDFRIFQNQTVLAILSQTLGKYD-----FPFEICASQNYPP 163

Query: 144 RTFCVQYAESDLHFIQRLCEEEGIHYHFRHSVDAHLLVFGDDQTVFPRLPVQCYSAPGGP 203
           R F VQY ESD  F+ RL  E G++Y+F H+  AH LV  DD           Y      
Sbjct: 164 REFQVQYGESDHDFMARLMHEWGLYYYFEHAEGAHKLVVVDDMAAHKPFANAAYETIPFH 223

Query: 204 HADTPVIQR----FDVRLGIRSQKTVRRDYDFEHPSVHLHD-SAGAASTLP--LEDYQYP 256
            A+  V +     F+    ++S + V  D+DF  P   L   SA    T    LE Y +P
Sbjct: 224 AAEDTVREEHCDSFNACEALQSGRWVTSDFDFTRPKADLQQVSAMPRKTAQNTLERYGWP 283

Query: 257 AGFTAHTRGKQLARRSLELHQRDRYRALGKSDQPVLRSGHFLEIRDHPDPSCNDLWLITS 316
             +   + G+QL R  +E       RA G  +   +  G  + +  HP    N  +L+T 
Sbjct: 284 GDYAVESEGEQLVRTRMEEVGSQGERASGSGNLRAVVPGCLITLERHPQSESNRQYLVTD 343

Query: 317 VRHEGYQPQVLEEATPATDVFQGYRNRFTATPWQAVHRPSLRHTKPTINGSQTATVTGPA 376
            R    +P    EA+   +VF+   +    +  +    P+    +P  +G QTA VTGPA
Sbjct: 344 ARLHMQEPG---EAS-GQEVFECRVDFDVISSGKVFRAPAPNAPRPRTSGPQTAIVTGPA 399

Query: 377 GEDVHCDVYGRVKVRFHWDRLDEADDKSSCWLRVASGWAGDGFGATMIPRVGMEVLVTFL 436
           G ++  D YGRVK+ FHW+R    D+ SSCW+RV+S WAG  FG   IPR+G EV+V F 
Sbjct: 400 GREIWTDQYGRVKLSFHWNRYCTKDENSSCWVRVSSPWAGTNFGGIQIPRIGQEVIVDFE 459

Query: 437 DGDPDRPLINGCLPNALHRPTYPLPLHKTRSVL--RSSSSLGGEGSNELYLEDRRGEELV 494
           +GDPDRP++ G + NA + P + LP + T+S L  RSS       +N L  ED++G+E V
Sbjct: 460 NGDPDRPIVTGRVYNADNMPPWTLPDNATQSGLLTRSSEGATDANANALRFEDKKGQEQV 519

Query: 495 YLRAQRDLEQRIGHDSRLEVAGERQEVIHGISTTHLKSEEHRQVTGD--------RKVLL 546
           +L A+R+ +  +  D    V  +R + I    T H+K +    V  D        R   +
Sbjct: 520 WLHAERNQDIEVERDETHWVGHDRSKTIDHDETVHVKHDRTETVGHDETITIGNNRMETI 579

Query: 547 KASDYLDVHGDSRTHVAQTLVIEAGQQLHLKSGASLVIDAGAELSLKAG-------GEHL 599
           KA++ L V  +    VA T   E G       G +  +  G   +   G       GE L
Sbjct: 580 KANELLTVLQNMNRFVALTSSEEVGIAKTSLVGLTQTVAVGKSKNETIGEDFSLDVGEKL 639

Query: 600 VIQAGGIFSSRPIALGGSASVTQLAGAFRVAGMPEVSKVQGTIMNL 645
           VI  G   S   +   G  ++T     FR  G     ++ G +++L
Sbjct: 640 VITVGK--SRLEMTKDGQVTLTGAKFDFRATG---AVRINGKVIDL 680