Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 330 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 7e-26
 Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 4/312 (1%)

Query: 20  ALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATT 79
           A GL +  L   +G+    +   +A    +   R+   AV    D  IGL + R +  ++
Sbjct: 21  AEGLPAETLLAGSGICAADLSRADACITTNQEMRVCTNAVALRRD--IGLELGRKMHVSS 78

Query: 80  FHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPAPAFEA 139
           +  LGYAL+   +  +     +RY  ++     L L  DGER          +PA     
Sbjct: 79  YGMLGYALLTCATFGDALRLALRYPALLGTLFELSLENDGERIWLTAADYRETPALEMFN 138

Query: 140 IDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEEDRLEFAAA 199
           ++         C + LG+    L        P     +H  F   + F+A  +   F   
Sbjct: 139 VEFCLVSLKIICDDLLGQPLPLLGARFEYSAPDYHARYHECFACSLHFEASANAFAFDKR 198

Query: 200 DFDSHLDDANPELAEH-NETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSAERIAQAL 258
             D  L  A+    +   +   K+ L       W  ++R  + AQL    P  E +A  +
Sbjct: 199 WLDQPLPLADAVTHQAMTDRCRKQNLEFTGRQAWLGRIRHLLAAQL-HAAPGIEGLAAQM 257

Query: 259 HLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTSSFNRAF 318
           + S R+L+RHL D G  +  LL E R   A   L      +  I+  LGF++T+SF  AF
Sbjct: 258 NCSARTLRRHLHDLGSSYQELLDELRFERAKQLLGQDELPIYRIAEQLGFSETASFRHAF 317

Query: 319 KRWTGMTPGQFR 330
            RW+G+ P QFR
Sbjct: 318 VRWSGVAPSQFR 329