Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 332 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 2e-29
 Identities = 96/339 (28%), Positives = 150/339 (44%), Gaps = 20/339 (5%)

Query: 1   MTEPTSLASWTRALRKQLDALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQ 60
           M E T  + + RA        G D + L  Q G+ P+ + +P AR      TRL ++   
Sbjct: 1   MRERTIASHYARAALGGARRAGYDYSGLLQQVGITPELLTEPRARIAPEQFTRLLQMLWL 60

Query: 61  ASGDPAIGLRVSRFVSATTFHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGE 120
           A  D  +G         T F  + +AL+   +L +  ER + ++ +       +L+ +GE
Sbjct: 61  ALDDEYLGFADGPSKRGT-FAMMCHALIHCRTLEKALERGLLFYSLFPQGPRWQLTREGE 119

Query: 121 RYRFRLLQLPGSPA--PAFEAIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWH 178
             R   L L  S    P     +    I+ R     +G+           P+P     + 
Sbjct: 120 MAR---LSLDDSQLWDPEHFLSECLLVIWHRLGSWLIGQRIRLHQATFSYPQPAHASEYD 176

Query: 179 TVFRAPVFFDAEEDRLEFAAADFDSHLDDANPELAEHNETV---LKRTLAQLQPLTWERK 235
            +F     F A    L F A          N  L +   T+   L+R+ A L     E  
Sbjct: 177 LLFPCAQVFGAPNSSLVFPARYL-------NLPLLQDERTLKHFLERSPADLLSRPDEGD 229

Query: 236 VRAAIEAQLPDGE----PSAERIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALLH 291
             ++   +L   +    P  E +AQ LH+S ++L+RHL +EG  F AL  E R ++A+ H
Sbjct: 230 SLSSQLRRLLSRDRSPWPDLEAVAQHLHISPQTLRRHLREEGTSFQALKDELRRDIAIYH 289

Query: 292 LRDPHCSLAEISHLLGFADTSSFNRAFKRWTGMTPGQFR 330
           L     SL EI+  LGF++ S+F+RAFK+WTG+TPG +R
Sbjct: 290 LGRADLSLQEIAEQLGFSEPSAFHRAFKKWTGLTPGAYR 328