Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 344 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 15/318 (4%)

Query: 20  ALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATT 79
           A  +D+ A    AG++P  ++ P AR        L+ L ++   D A+   +SR +   +
Sbjct: 26  AAPIDARAALEDAGIEPALLEAPGARVTAEQYVALFALLMERLDDEALCF-LSRRLKRGS 84

Query: 80  FHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPAPAFEA 139
           F  +  A + + +      R+     ++ D L+L L  DG    F L     +       
Sbjct: 85  FALMTRATLGAPTFEVALRRVAHTFSLLQDDLTLVLLQDGPLAGFGLRLNDSAAVQQNFL 144

Query: 140 IDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEEDRLEFAAA 199
            +    +Y R      G   A          P     +  VF  P+ F      + F A 
Sbjct: 145 HELMLRVYWRLLAWLHGGRLAARRFDFGFELPPYADGYAKVFPGPLQFGQPCTAVWFDAG 204

Query: 200 DFDS--HLDDA--NPELAEHNETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSAERIA 255
              +  H D    N  LA     V+   LA       E+ V A + + L    P+   +A
Sbjct: 205 ALQTPVHRDAQAMNAFLAAAPANVILPRLA-------EQAVSARVRSVLQQNRPAWADLA 257

Query: 256 QA---LHLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTS 312
            A   LH+S+ +LQRHLA EG  F +L  + R +LA++ L      LA ++  LGFAD++
Sbjct: 258 TAASSLHMSVSTLQRHLATEGTSFQSLKDQLRRDLAIVRLNTSTVPLAALAEELGFADSA 317

Query: 313 SFNRAFKRWTGMTPGQFR 330
           +F RAFK WTG  PG +R
Sbjct: 318 AFQRAFKAWTGGAPGSYR 335