Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 9e-32
 Identities = 90/311 (28%), Positives = 143/311 (45%), Gaps = 6/311 (1%)

Query: 22  GLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATTFH 81
           G +++AL   +G+ P  +   +AR       ++   AV    D  IGL + + +  + + 
Sbjct: 49  GCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRED--IGLELGQRMRVSCYG 106

Query: 82  ALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPA-PAFEAI 140
            LGYAL++S +L +     ++Y  ++     L L  DG+R  F       SPA  AF A 
Sbjct: 107 MLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDSPALSAFNAE 166

Query: 141 DAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEEDRLEFAAAD 200
               ++ V  C + LGR    L      P P     +   F+ P+ F AE++   F    
Sbjct: 167 FCLVSLKV-ICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFERRW 225

Query: 201 FDSHLDDANPELAEH-NETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSAERIAQALH 259
            D  L  A+P   +  +E   +  L       W  ++R  +  QL D  P  E +A+ ++
Sbjct: 226 LDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQL-DAAPGLEGLARQMN 284

Query: 260 LSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTSSFNRAFK 319
            S R+L+RHL   G  +  LL E R   A   L D    +  I+  LGF++T+SF  AF+
Sbjct: 285 CSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAFQ 344

Query: 320 RWTGMTPGQFR 330
           RW+G+ P  FR
Sbjct: 345 RWSGVAPSHFR 355