Pairwise Alignments

Query, 383 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 402 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  137 bits (346), Expect = 4e-37
 Identities = 108/375 (28%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 24  FFIAGFGIAAWAPLVPYAKARADLSEGTLGLLLLCLGVGSIIAMPAAGALASRFGCRRVL 83
           FF+ G  +A+WA   P  +    +S   +G +L  L +GS+  +  +  L  RFG R V+
Sbjct: 21  FFLPGLLMASWATRTPAIRDILSVSIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVI 80

Query: 84  --SAGTIMICLALPTLATVSSIPLLMA-GLFLFGAGLGTVDSTVNLQAVIVERASGKTMM 140
             +    +I + + +LA   + PLL A GL +FGA  G+ +  +N++   VER   KT++
Sbjct: 81  LVTMSCALIGMMILSLALWLTSPLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVL 140

Query: 141 SGFHGLFSLGGIVGAAGVSGLLGLGLSPLQATLVVIVITLAALLKAAP-----HLLPYGS 195
              HG +SLG + GA     L   G+         + I LAAL+  AP       +P G+
Sbjct: 141 PMMHGFYSLGTLAGAGVGMALTAFGVP------ATVHILLAALVGIAPIYIAIQAIPDGT 194

Query: 196 ESSGPAFAVPHGV----------VLFIGCLCFVVFLAEGAVLDWSAVFLSAERGLDEAYA 245
             +  A    HG           +L IG +   +  AEG+  DW  + +    G      
Sbjct: 195 GKNA-ADGTQHGEKGVPFYRDIQLLLIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSG 253

Query: 246 GLGYAAFALTMTAGRLTGDAIVRRLGATRVIVAGGALAAAGTFLATLSPAWEVALLGYAL 305
            L YA F L MT GR TG   + R     V+ A   + A G  L     +  VA +   L
Sbjct: 254 SLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVL 313

Query: 306 VGAGCSNIVPVLYTAVGKQNV-MPEHIAVPAITTLGYAGILAGPAVIGFIAHGSSLATAF 364
            G G S   P+  +A        P  ++V  + T GY   L GP ++G++     L +A 
Sbjct: 314 WGLGASLGFPLTISAASDTGPDAPTRVSV--VATTGYLAFLVGPPLLGYLGEHYGLRSAM 371

Query: 365 LLIGGLLAAVAVSGK 379
           L++  L+   A+  K
Sbjct: 372 LVVLALVILAAIVAK 386