Pairwise Alignments

Query, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  288 bits (736), Expect = 2e-82
 Identities = 157/313 (50%), Positives = 200/313 (63%), Gaps = 4/313 (1%)

Query: 6   RDEAAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATGLLPKARLQALC 65
           R++AA WF R+QDA       ++  AW      H+ E++ L  +W A   +P+  L+ALC
Sbjct: 18  REQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLEALC 77

Query: 66  EA-PVERPKRRAVLRYAVAAGVIAVALGLGLFSGLDHPK-PYSAEFSTGVGEHRQVALPD 123
              PV++  RR  +R A+AA V  VALGLG +SG  H +  +     T   E RQV LPD
Sbjct: 78  RPDPVQQLPRRRFMRQALAASVAVVALGLG-WSGWHHLQLNHQGSLQTAFNERRQVELPD 136

Query: 124 GSVMDLNSRTVVAVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAAGAGQVTVTGTRFDV 183
           GS ++LN  T + V++  G+R V L  GE MFSV HD++RPFVV    G V VTGTRFDV
Sbjct: 137 GSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIVTGTRFDV 196

Query: 184 RRDEGQTRVMVEAGTVKVQGDSPDNLVTLTAGLGTHVDNKGSVAAAYTVNTEELTAWRTG 243
           R D   TRV VE G+V+VQG   D+   LTAG G+H+D +G VAA Y VNT  +TAWR G
Sbjct: 197 RLDPASTRVAVEQGSVRVQGKG-DSPAQLTAGQGSHIDAQGLVAAPYAVNTGAITAWRQG 255

Query: 244 KLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKANDTDALLKALPHILPVAL 303
           KLVF+NA L EV  E SRYR +PLRV+   V  LRL+  F  NDTDALL+ALP ILPVA+
Sbjct: 256 KLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALPSILPVAI 315

Query: 304 RTLPDGSQEIISR 316
           +   DGS EII++
Sbjct: 316 KAHEDGSSEIIAK 328