Pairwise Alignments

Query, 409 a.a., transporter from Pseudomonas simiae WCS417

Subject, 410 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 84/362 (23%), Positives = 142/362 (39%), Gaps = 20/362 (5%)

Query: 4   LVQSNARPLDSVVLAVVLTGFVASTYGFGVYLFAN--LVVDMRRDIGFDYTTVGLITGGA 61
           ++ ++A P  SV L +   G  AS    G+  FA   L+  + +   F    V  +    
Sbjct: 1   MLDTHAPPRRSVWLPI-FAGLCASLVSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAAN 59

Query: 62  QIGFLLFSSVTSYISRFFEGWKISLVSTVMTSLALLGLSVSNSIWLSGALLILLGGCSAS 121
            +G+L+ + +   I++         +  V  +LA        S+    A  +L G    +
Sbjct: 60  LVGYLIGALIGRPIAQRTSNKTALRMMMVAVTLAFFACGFPLSVVWFFAWRLLSGIAGGA 119

Query: 122 VYIPLAEIVTKGFSPGNRSRVMGLISSGTSYGVFINGLLVSFLTLNGGWRSIWLTAGLIS 181
           + + +A  V        R    G I  G   G+  +G LV  L LN G +  W   GL++
Sbjct: 120 IMVLVAATVLPHVPAARRGLASGAIFLGIGLGIAGSGTLVPPL-LNLGLQQTWFGLGLLA 178

Query: 182 VALCGVAWFLLRNLAAGQDAGFSGEDTTAFDRQQPWLGRSLYLTWAIAFLNGMALLPFQT 241
           + L G +WF        + A  +G                +YL +A        L+P   
Sbjct: 179 LVLTGASWFAWPTGTLHEAAAPTGTSAPT--------PSGVYLLFAQYAFMAAGLVPAMV 230

Query: 242 YLAPFLRDELGVSVRDAGFIWTTLGAVGMASGFLVGWIADKVGVRASLAMCFLSAGLAAS 301
           +L  ++   LG        IW   G   +      G++ADK+G R S+ +  +   +A  
Sbjct: 231 FLVDYVARGLGDGAHIGAMIWVMYGLGAIVGPVTYGFLADKLGARLSIRVVLVVQAIAVG 290

Query: 302 LV---FSFNSLPLF--YLAAF---LFALAFYPIFGLVPSYIGQIVPVSRLTQAFGIANVL 353
           L+    SF +L +    L +F   +  LA   +  L+P++  Q V  SR T +F     L
Sbjct: 291 LLPFTGSFTALAVLAVVLGSFPPGIVPLALARVHELLPNHHQQHVAWSRATVSFATFQAL 350

Query: 354 IG 355
            G
Sbjct: 351 SG 352