Pairwise Alignments

Query, 409 a.a., transporter from Pseudomonas simiae WCS417

Subject, 441 a.a., major facilitator family transporter from Pseudomonas putida KT2440

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 36/316 (11%)

Query: 114 LLGGCSASVYIPLAEIVTKGFSPGNRSRVMGLISSGTSYGVFINGLLVSFLTLNGGWRSI 173
           +LG   A+ Y    + V   F  G R+   GL ++GT+ G  +   L+  +    GW++ 
Sbjct: 131 ILGLTEAANYPACVKTVRLWFPAGERAIATGLFNAGTNVGAMVTPALLPLILAVWGWQAA 190

Query: 174 WLTAGLISVALCGVAWFLLRNL-------AAGQDAGFSGEDTTAFDRQQPWLGRSLYL-- 224
           ++  G  S+ L  V +++L+             +  +  +D      + P+  R L L  
Sbjct: 191 FIAMG--SLGLVWVVFWVLKYYNPEDHPRVRQSEVQYIQQDDEPEPTRVPF-SRILRLRG 247

Query: 225 TWAIAFLNGMALLPFQTY---LAPFLRDE--LGVSVRDAG----FIWTTLGAVGMASGFL 275
           TWA A    +    F  Y   L PFL  +  LG++V   G     IW T     +  G L
Sbjct: 248 TWAFAVAYAITAPVFWFYLYWLPPFLNQQYSLGINVTQMGIPLIIIWLTADFGSIGGGIL 307

Query: 276 VGWIADKVGVRAS---LAMCFLSAGLAASLVFSFNSLPLFY-LAAFLFALAFYP-----I 326
             W+  + GVRA+   L    + A    S++F+ N+  L+  +AA   A+  +      I
Sbjct: 308 SSWLIGR-GVRATTARLVSMLIFACTMLSVIFAANASGLWVAVAAISIAVGAHQAWTANI 366

Query: 327 FGLVPSYIGQIVPVSRLTQAFGIANVLIGLGGV-CGNFLGGFSKDLTGSFSTVYWVVALL 385
           + LV  Y     P   ++  FG  ++   +GG+     +G        +++ ++ ++  +
Sbjct: 367 WSLVMDY----TPKHLVSTVFGFGSMCAAIGGMFMTQIVGSVLTATNNNYAVLFTMIPAM 422

Query: 386 LFVQCVMVFLLGKRPI 401
            F+  V ++ +  R +
Sbjct: 423 YFLALVWMYFMAPRKV 438



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 14/106 (13%)

Query: 234 MALLPFQTYLAPFLRDELGVS--VRDAGFIWTTLG--------AVGMASGFLV-GWIADK 282
           +AL+ F T L    R  LG+   V      WT +          VG A GFL+ G + DK
Sbjct: 36  LALVFFATTLNYIDRAALGIMQPVLAKEMSWTAMDYANINFWFQVGYAIGFLLQGRLIDK 95

Query: 283 VGVRASLAMCFLSAGLAASLVFSFNSLPLFYLAAFLFAL---AFYP 325
           VGV+ +     L   LA        S   F +  F+  L   A YP
Sbjct: 96  VGVKRAFFFAVLLWSLATGAHGLATSAAGFMVCRFILGLTEAANYP 141