Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  197 bits (501), Expect = 3e-55
 Identities = 117/320 (36%), Positives = 180/320 (56%), Gaps = 8/320 (2%)

Query: 3   RIVHVLAFDNAQVLDVTGPLQVFASTNDLARQRGEPLPYAVSVIAAQSEPVMTSAGLALV 62
           + V +  F +  +LD+ GPL+VF+  N   R       Y +  +  +  P+  S G+A+ 
Sbjct: 2   KTVAMALFPDFLLLDMAGPLEVFSIAN---RYLPAAEHYRILTLGTEPGPLRASNGVAVQ 58

Query: 63  AEPL--PAADAPCDTLVIAGGWGVYGAAEDPALVDWVREKAKHTRRMTSVCTGAFLLAAS 120
            + L   A DA  D L++ GG G Y     PAL+ W++  A   RR  S+CTGAF+L  +
Sbjct: 59  TDLLLDQAQDA-YDLLLVPGGPGAYNECH-PALLPWLKAAAPRARRFGSICTGAFVLGHA 116

Query: 121 GMLDGCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEEDL 180
           G+LD  RV THW   E L + FP   VE++ I++Q G + TS GVTAGIDL L++V +D 
Sbjct: 117 GLLDNHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDH 176

Query: 181 GRAIALEVARHLVVFLKRPGGQSQFS-VTLSLQKDDSRFAELHAWMAENLTLDLNIPTLA 239
           G+ +A++VA+ L+V +KR GGQ+QFS +T ++   ++    +   + E+L     I ++A
Sbjct: 177 GKQVAVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMA 236

Query: 240 AQAGMSERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETL 299
           A AGMS R F R +  E   TP   ++  R++ AR+ L  +   +K +A   GFG    +
Sbjct: 237 ALAGMSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHM 296

Query: 300 RRSFLRALSVTPQAYRERFS 319
           R  F   L + P  YR++FS
Sbjct: 297 RFLFSEKLGLNPTQYRQQFS 316