Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 323 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  234 bits (596), Expect = 3e-66
 Identities = 137/316 (43%), Positives = 186/316 (58%), Gaps = 4/316 (1%)

Query: 1   MPRIVHVLAFDNAQVLDVTGPLQVFASTNDLARQRGEPLPYAVSVIAAQSEPVMTSAGLA 60
           M R V  L     Q+ D+ GPL VF    ++ R R  P  Y V+V++ +   V  SAGL 
Sbjct: 1   MSRSVAFLLVPEFQLFDMAGPLSVFQVAAEIGRGRRGPA-YEVAVLSERGGRVACSAGLE 59

Query: 61  LVAEPLPAADAPCDTLVIAGGWGVYG-AAEDPALVDWVREKAKHTRRMTSVCTGAFLLAA 119
           +        D+   T+++ GG G     A  PAL+  +R      RR+ SVCTGAFLLA 
Sbjct: 60  MHTRAW--RDSQAGTVIVPGGVGARKPGAATPALMQHLRGALAAKRRVASVCTGAFLLAE 117

Query: 120 SGMLDGCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEED 179
           +G+LDG    THW +   L R +P++TV+++ IF++ G VW+SAG+ AGIDL LA+VE D
Sbjct: 118 AGLLDGRHATTHWRQAALLQRNYPAITVDADRIFVRDGNVWSSAGIAAGIDLALAMVEAD 177

Query: 180 LGRAIALEVARHLVVFLKRPGGQSQFSVTLSLQKDDSRFAELHAWMAENLTLDLNIPTLA 239
           LG   A  VAR +VV+ +R GGQSQFS    L     R   + A++ ENLT DL+I  LA
Sbjct: 178 LGADTAGAVAREMVVYHRRTGGQSQFSALQDLAPQSGRMRAVLAYIGENLTADLDIERLA 237

Query: 240 AQAGMSERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETL 299
             A +S R F+R ++AETGQTPA+AVE IR E AR  +    +SI+ +A   GF   E +
Sbjct: 238 EVACVSPRQFMRAFKAETGQTPAKAVERIRAEVARTHIEGGDSSIEAVARLTGFEDTERM 297

Query: 300 RRSFLRALSVTPQAYR 315
           RR+F+R     PQA R
Sbjct: 298 RRAFVRVYGQPPQALR 313