Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 180 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 8e-37
 Identities = 68/151 (45%), Positives = 98/151 (64%), Gaps = 1/151 (0%)

Query: 15  LYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQPRAYLSSIARSLMID 74
           +Y  HH WL GWL ++ GC +HAADLA + F+R+L     Q +++PRA+L++ A  L+ID
Sbjct: 20  MYSEHHGWLHGWLRKKLGCSQHAADLAHDAFIRVLMLAEPQQIKEPRAFLATTAGRLLID 79

Query: 75  QYRRRELERAYLESLA-HFPQVEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLAQL 133
             RRR +E+AY+E+L        +P      + L +LERI  +L  L  + REAFLL++L
Sbjct: 80  GARRRRIEKAYMEALVIQCEDAGMPDPAAIHVALQALERIAEMLAGLPAKAREAFLLSRL 139

Query: 134 DGLTCAQIALRLGVSKATVERDLSKALHACY 164
           DGLT ++IA RL VS +TV+  +S AL  CY
Sbjct: 140 DGLTYSEIATRLDVSASTVKNYISSALVHCY 170