Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  164 bits (415), Expect = 7e-46
 Identities = 80/150 (53%), Positives = 108/150 (72%)

Query: 15  LYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQPRAYLSSIARSLMID 74
           LYHAHH WL GWL RR GC   AADLAQ+T++RLL AR    L +PRA+L+++A+ ++ +
Sbjct: 18  LYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRVLCN 77

Query: 75  QYRRRELERAYLESLAHFPQVEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLAQLD 134
            +RR+ELERAYL++LA  P+   P EE + +I ++L  +D LLD L P V+ AFLLAQ+D
Sbjct: 78  HFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLAQVD 137

Query: 135 GLTCAQIALRLGVSKATVERDLSKALHACY 164
           GL   +IA  LG+S ATV+R L+KA   CY
Sbjct: 138 GLGQGEIARELGISLATVKRYLNKAAMRCY 167