Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 4e-20
 Identities = 48/151 (31%), Positives = 90/151 (59%), Gaps = 2/151 (1%)

Query: 23  LRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQPRAYLSSIARSLMIDQYRRRELE 82
           L  +LS R G R+ A D+A + ++R+L     + ++ PRA+L   A +L++D++RR+ + 
Sbjct: 8   LVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRRQLVR 67

Query: 83  RAY-LESLAHFPQVEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLAQLDGLTCAQI 141
           +A  L++L    ++     +  L +   L  + + LD+L    R++FLL +++GL+  QI
Sbjct: 68  QAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGLSHQQI 127

Query: 142 ALRLGVSKATVERDLSKALHAC-YRLRYVEN 171
           A RLG+S++ VE+ +  A+  C  R+R  E+
Sbjct: 128 AERLGISRSLVEKHIVNAMKHCRVRMRQWES 158