Pairwise Alignments

Query, 745 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 4e-29
 Identities = 187/781 (23%), Positives = 291/781 (37%), Gaps = 90/781 (11%)

Query: 16  LALCCSMSLTAHAATPATPEDANNRQDGNTLELGATSINAEAPAPNALPPVYAGGQVARG 75
           + +  S S  AH A  A  ED   +   N++ LGATSI  E     +     A  Q    
Sbjct: 20  IGVALSASAIAHQAQAA--EDTEQKGQRNSISLGATSITGEEQDNTSYQVEKASSQKY-- 75

Query: 76  GQLGVLGNQDIMDVPFSMASYTEKLIRDQQAETVGDVLLNDSSVRQASGFAN--QAQTFM 133
                     ++D P S+    +++++D  A ++ D L     +   +G     Q     
Sbjct: 76  -------TAPLVDTPRSVTVVPQQVLKDTAATSLQDALRTVPGITFGAGEGGNPQGDRPF 128

Query: 134 IRGLPLNGDDISFNGL--YGILPRQIISTDALERVEVFKGPNAFINGVTPGGSGIGGGVN 191
           IRG    GD    +G+   G   R+I     +E +EV KGPN+       G    GG +N
Sbjct: 129 IRGFDAQGDTY-LDGVRDTGGQSREIFD---IESIEVSKGPNSSFG----GRGSAGGSLN 180

Query: 192 LQPKRADDVPLRRFSTDISSDGRVGEHLDIGQRFGEDNRFGARVNL-SQREGDTGIDDEN 250
           L  K               SD      LD+ ++F +D+    R+NL S  +   G D  N
Sbjct: 181 LVSKTPQARDFTNGGFTYGSDQTRRYVLDVNRQFLDDSA-AFRLNLMSHEQNVAGRDAVN 239

Query: 251 QRSKLFAVGLDY-RGDALRLSSDFVYQKQ---RINGGRNSVFLGTAT-HIPDAPS--ADT 303
                 A  L +  G   R++  + + +      +G        TAT H+ D P+   D+
Sbjct: 240 YDRWGVAPSLTFGLGTPTRVNLSYYHMESDDLPDSGIPYGYGSSTATAHVHDKPNDGGDS 299

Query: 304 NYAPSWSNTNLEDT---LGMLRAEYDLNDNWTVYAAGGAKHTREMGQYSSVTLTDNLGNA 360
           N      + +   T   +     E+DLNDN T+      +H      Y      D+  N 
Sbjct: 300 NNFYGLKDRDFRKTRADISTFSIEHDLNDNMTL--KNTLRHGSTGQDYILTQPDDSKFNV 357

Query: 361 TASGSTIAHEEDNSSL------MGGLNGKFQTGPVSHRLNFGLAGIWTQARNAYVFATPR 414
              G+         S          L G FQ     H  + GL     + R +    +P 
Sbjct: 358 NRFGTVWRRANSRVSTTTTTTNQTDLFGSFQALGFKHSYSTGLEFTGEETRVSNYTISPN 417

Query: 415 T---LTNIYNPVTGAPPALNNP-----------RNTPGTDFSDPTITAKTFVRSTAVSDT 460
           T    T     + G   +L+NP           RN  GT         K   R   V DT
Sbjct: 418 TNPVCTVAKGSLGGQCTSLSNPNPDDAWTGSIARNYYGT-------ATKATSRGAYVFDT 470

Query: 461 LGFFDDRLLVTVGARRQQI-VVQGYNYMSGTRTANYDESITTPVYGLVFKPWEHVSFYAN 519
           +   D + L+ VG R      V   +  +G      D        GLV+KP E+ S YA+
Sbjct: 471 IE-LDPKWLLNVGLRYDTFDTVANTDSATGRSKIKEDSQFFNWQAGLVWKPVENASIYAS 529

Query: 520 RIEGL--AQGPTSPVNSGNRTVIG-GGQPYAPARSKQIEAGVKVDM--GTYGATLGVYRI 574
                  A G     + GN    G       P  +   E G K D+       T  V+R 
Sbjct: 530 YATSATPAGGLVGEGSDGNPLSAGAASSDLQPEETVNYELGTKWDLFHDRLSLTAAVFRT 589

Query: 575 EQPGAGYVQVIDATTARYVREGQQINKGVELNVFGEPVSGLRLLGGVTVMKTELKDT--- 631
           E+       ++DA T  Y   G+    GVEL+  G+     ++  G + + +EL  +   
Sbjct: 590 EKKNTRI--LVDALT--YQNAGESQVDGVELSASGKITDQWQVFAGYSYLDSELVKSGLN 645

Query: 632 ------QNGANDGNRAIGVPSFQLNANVDWDVPGLQGVTLNGRMLRTGGQYADAANNLSL 685
                  +G+N GN+    P    +    +DV     +T+ G        Y DA N + +
Sbjct: 646 GRNGVVSSGSNKGNQMPNTPKNTFSLWTTYDV--TSKLTIGGGAFYVDQVYGDAGNTVYV 703

Query: 686 PAWNRFDIGARYNFKVAQRDVTLGATVENVANEKYWESA-QGGFLSQGDPRVAKLSATVD 744
           P++ R+D  A Y      ++V L   V+N+ ++ Y++ A    F +Q   R A L+ +  
Sbjct: 704 PSYTRYDAMASYKL---TKNVDLQLNVQNLTDKLYYDKAFSTHFANQAAGRTALLTTSFH 760

Query: 745 F 745
           F
Sbjct: 761 F 761