Pairwise Alignments

Query, 745 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 1e-26
 Identities = 174/750 (23%), Positives = 285/750 (38%), Gaps = 84/750 (11%)

Query: 42  DGNTLELGATSINAEAPAPNALPPVYAGGQVARGGQLGVLGNQDIMDVPFSMASYTEKLI 101
           +G  +EL AT+I+    A +   PV   G VA     G   +  +++ P S++  T+  +
Sbjct: 116 NGGAMELQATTISGAYQAESPTGPV--SGYVATRSLSGTKTDTALIETPQSISIVTKDQM 173

Query: 102 RDQQAETVGDVLLNDSSV--RQASGFANQAQTFMIRGLPLNG--DDISFNGLYGILPRQI 157
           R Q AE++  +L   ++V        A++     IRG       D +        LP++ 
Sbjct: 174 RAQNAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQK- 232

Query: 158 ISTDA--LERVEVFKGPNAFINGV-TPGGSGIGGGVNLQPKRADDVPLRRFSTDISSDGR 214
              DA  LERVEV +GP + + G  TP G      +N+  KR  D P      +  +  +
Sbjct: 233 ---DAFDLERVEVLRGPASVLYGQGTPSGV-----INMVSKRPLDTPFHEVGVEYGTFNK 284

Query: 215 VGEHLDIGQRFGEDNRFGARVNLSQREGDTGIDDENQRSKLFAVGLDYR-GDALRLSSDF 273
                D+     +   +  RV     + D  ++    R +  +    +R  DA  L+   
Sbjct: 285 KRTTFDLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLG 344

Query: 274 VYQKQRINGGRNSV-FLGTATHIPDAPSADTNYAPSWSNTNLED----TLGMLRAEYDLN 328
            +QK        SV   G+  H P   S D ++     N    D    ++G    E+  +
Sbjct: 345 HFQKDPKGASYGSVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWA-FEHHFD 403

Query: 329 DNWTVYAAGGAKHTREMGQYSSVTLTDNLGN-ATASGSTIAHEEDNSS--LMGGLNGKFQ 385
           D WTV     A++ R  GQY S+     + +  T   STIA + D  +  L   +  KF 
Sbjct: 404 DVWTVRQ--NARYLRSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFD 461

Query: 386 TGPVSHRLNFGL--AGIWTQARNAYVFATPRTLTNIYNPVTGAPPALNNPR-NTPGTDFS 442
           TGP+ H L  GL      T   +     T     +I+NPV GA  A+  P   T GT  S
Sbjct: 462 TGPLQHTLLMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGA--AVPVPAYTTDGTSRS 519

Query: 443 DPTITAKTFVRSTAVSDTLGFFDDRLLVTVGARRQQIVVQG--YNYMSGTRT-ANYDESI 499
           + T           + + + +  D+ ++ +G R              SG ++ ++ D   
Sbjct: 520 EQT--------GVYLQEQMKW--DKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKA 569

Query: 500 TTPVYGLVFKPWEHVSFYANRIEGLAQGPTSPVNSGNRTVIGGGQPYAPARSKQIEAGVK 559
            T   GLV+     ++ YA+  E     P S           GG  + P   KQ E G+K
Sbjct: 570 FTGRIGLVYLFDNGLAPYASYAESF--NPQSGTGY-------GGSVFKPTEGKQYEIGIK 620

Query: 560 VDMGTYGA--TLGVYRIEQPGAGYVQV----IDATTARYVREGQQINKGVELNVFGEPVS 613
                  +  T  ++ + Q            +  T     ++G+  ++G EL        
Sbjct: 621 YQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASLND 680

Query: 614 GLRLLGGVTVMKTELKDTQNG---------------ANDGNRAIGVPSFQLNANVDWDVP 658
            L +      +   +  + N                A +G    GVP    +A  D+ V 
Sbjct: 681 NLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVH 740

Query: 659 G--LQGVTLNGRMLRTGGQYADAANNLSLPAWNRFDIGARY---NFKVAQRDVTLGATVE 713
              L+G  +       G  + D AN L +P +  FD    Y   N    + ++ L     
Sbjct: 741 DGKLKGFGVGAGARYVGSSWGDTANTLKVPGYTLFDAAVHYDIPNIARLKDNLRLALNAT 800

Query: 714 NVANEKYWESAQG-GFLSQGDPRVAKLSAT 742
           N+AN++Y  S     +   G  R  + SAT
Sbjct: 801 NLANKEYVASCYSYSWCWYGSQRTVQASAT 830