Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score =  184 bits (468), Expect = 2e-51
 Identities = 124/349 (35%), Positives = 177/349 (50%), Gaps = 20/349 (5%)

Query: 9   LLGSTIAMCTA--AMAADTDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAKTYG-- 64
           LL +T A+  A  A+AA      L AAAK EG + +V +P DW  +          Y   
Sbjct: 8   LLATTTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPHDWCGYGDVIAAFKAKYPEI 67

Query: 65  -LKHIDTDMSSAQEIAKFKAEKDNA---SADIGDVGAAFGPIAVKQEVTQPYKPSTWAQV 120
            +  ++ D  SA E+   KA KDN    + D+ DVG AFGP    + + QPYK STWA++
Sbjct: 68  TVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEI 127

Query: 121 PDWAKDKDGHWALAYTGTIAFIVNKKLLHGSEVPTSWADLQTGKYKVSV---GDVSTAAQ 177
           PD  KD DG+W   Y G ++  VNK L+    VP  WADL   +Y   V   GD   + Q
Sbjct: 128 PDNVKDADGYWYGDYYGVMSMFVNKDLV--KNVPKDWADLLKPEYSGQVALAGDPRASNQ 185

Query: 178 ASNAVLAAAI---ANKGDEKNIAPGLQFFTKIAQQGRLGLSNPTIATMEKGEVEVGIVWD 234
           A   VLAA +   A  G E   A GL++F  + + G          T+ +G   + + WD
Sbjct: 186 AILGVLAAGLSTGAKSGKEAGEA-GLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAWD 244

Query: 235 FNGLSYKAKMANPDDYVVLIPSDGSVKSGYTTIINKYAKHPNAAKLTREYIFSDAGQLNL 294
           +N LS+K  + +     V++P  G +   Y   I+ YA HPNAAKL  E+++SD GQL  
Sbjct: 245 YNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHLYSDDGQLGW 304

Query: 295 AKGNARPIRAETDL---KLPADIAKNLIPGEQYTKANPQPIKDAEAWEA 340
            KG   PIR    +   K+P ++  +L P   Y KA    +++ +A +A
Sbjct: 305 LKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAYEKAIFPTLEEVDANKA 353