Pairwise Alignments

Query, 278 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 38/278 (13%)

Query: 14  PFALFF----IVFEIAPLVWVLI------NSLQTEEAGWGLENFTRIFSSKFYLQAIQFS 63
           P AL F    ++F +APLV V +      N+L    +G+ L  F  +F    ++QA   S
Sbjct: 6   PLALGFHGVVVLFMMAPLVVVCLVAFTPENTLSLPTSGFSLRWFRAVFERADFIQAFYNS 65

Query: 64  LEISFYSSIFGIIIATLGSYSLRRVDSPLRNFVTAFANMTSNFAGVPLAFAFI---ILLG 120
           L ++F ++    +IA   + ++ R   P RNF +A          + L  A +    L+G
Sbjct: 66  LILAFTAATLATLIAVPAALAISRYTFPGRNFFSALFLSPIIIPHLVLGVAMLRLFALMG 125

Query: 121 FNGSITIMLKQAGIIQDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDALREDWRESASLL 180
            NGS                   T L++ +     P  + L+  A   +     ++A  L
Sbjct: 126 VNGSF------------------TWLMLAHVVIITPYVLRLVLAAAIGIDRSAEQAAESL 167

Query: 181 GANGWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAGLVSGD 240
           GA+ +  +R I LP++ P + G +++   N+         +++     LP+R+   V   
Sbjct: 168 GASRFTLFRQITLPMILPGVAGGWLLAFINSFDEVTLSIFVSSPATQTLPVRM--YVYAT 225

Query: 241 VSLDPYLASALAVVLVALMTVVTVVHQLLLKRSYHVSR 278
            S+DP +A+  A+V+      +T    +LL R Y + R
Sbjct: 226 ESIDPMMAAVSALVI-----ALTAATMILLDRVYGLDR 258