Pairwise Alignments

Query, 704 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

 Score =  486 bits (1250), Expect = e-141
 Identities = 304/708 (42%), Positives = 407/708 (57%), Gaps = 57/708 (8%)

Query: 12  MKHLFPSTALALFIGLGFASMSTNTFA------ANSWDNLQPDRDEVIASLNVVELLKRH 65
           M   F  TALA     G  +++  TFA      A+    L+ +      S  V     R 
Sbjct: 1   MNMFFRLTALA-----GLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRS 55

Query: 66  HYSKPPLDDARSVIIYDSYLKLLDPSRSYFLASDIAEFDKWKTQFDDFLKSGDLQPAFTI 125
           HY +  LD A S  I+D YL LLD S +  LASD+ +F K KT+  D L+SG L   + +
Sbjct: 56  HYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDL 115

Query: 126 YKRYLDRVKARLDFALGQLDKGVDKLDFTQKETLLVDRKDAPWLTSTAALDDLWRKRVKD 185
           Y     R   R  +AL  L+K    +DFT  +T  +DR  APW  + A L+ LW  +VK 
Sbjct: 116 YNLAQKRRFERYQYALSVLEK---PMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKF 172

Query: 186 EVLRLKIAGKEPKAIQELLTKRYKNQLARLDQTRAEDIFQAYINTFAMSYDPHTNYLSPD 245
           + L LK+ GK  K I+E LT+RYK  + RL QT +ED+F   +  FA   DPHTNYLSP 
Sbjct: 173 DELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPR 232

Query: 246 NAENFDINMSLSLEGIGAVLQSDNDQVKIVRLVPAGPADKTKQVAPADKIIGVAQGDKEM 305
           N E F+  MSLSLEGIGAVLQ D+D   I  +V  GPA K+K ++  DKI+GV Q  K M
Sbjct: 233 NTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPM 292

Query: 306 VDVVGWRLDEVVKLIRGPKGSVVRLEVIPHTNAPNDQTSKIVSITREAVKLEDQAVQKKV 365
           VDV+GWRLD+VV LI+GPKGS VRLE++P   A     ++ V++TRE ++LED+AV+   
Sbjct: 293 VDVIGWRLDDVVALIKGPKGSKVRLEILP---AGKGTKTRTVTLTRERIRLEDRAVK--- 346

Query: 366 LNLKQDGKDYKLGVIEIPAFYLDFKAFRAGDPDYKSTTRDVKKILTELQKEKVDGVVIDL 425
           +++K  GK+ K+GV++IP FY+               T DVK  L +L+K+ V  V+IDL
Sbjct: 347 MSVKTVGKE-KVGVLDIPGFYV-------------GLTDDVKVQLQKLEKQNVSSVIIDL 392

Query: 426 RNNGGGSLQEATELTSLFIDKGPTVLVRNADGRVDVLEDENPGAFYKGPMALLVNRLSAS 485
           R+NGGG+L EA  L+ LFI  GP V VR+ +G+V    D +   FYKGP+ +LV+R SAS
Sbjct: 393 RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSAS 452

Query: 486 ASEIFAGAMQDYHRAMIIGGQTFGKGTVQTIQPLNH-------------GELKLTLAKFY 532
           ASEIFA AMQDY RA+++G  TFGKGTVQ  + LN              G ++ T+ KFY
Sbjct: 453 ASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFY 512

Query: 533 RVSGQSTQHQGVLPDIDFPSIIDTKEIGESALPEAMPWDTIRPAIKPASDPFKPFLAQLK 592
           RV+G STQ +GV PDI  P+  +  E GE     A+PWD+I  A    S     F  +L 
Sbjct: 513 RVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELL 572

Query: 593 ADHDTRSAKDAEFVFIRDKLALAKKLMEEKT-VSLNEVDRRAQHADIENKQLALENIRRK 651
            +H+ R AKD EF  I   +A    + +++  VSLN   R  ++ + +  +LA  N R K
Sbjct: 573 KEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLARLNERFK 632

Query: 652 AKGEDPLKELKKEDEDALPTEAEKTKPEDDAYLAETGRILLDYLKITK 699
            +G+  LK+L     D LP    K   E D YL ET  I LD  K+ K
Sbjct: 633 REGKPELKKL-----DDLP----KDYQEPDPYLDETVNIALDLAKLEK 671