Pairwise Alignments

Query, 527 a.a., BCCT transporter from Pseudomonas simiae WCS417

Subject, 657 a.a., choline/carnitine/betaine transporter BetTC from Pseudomonas putida KT2440

 Score =  224 bits (572), Expect = 6e-63
 Identities = 146/521 (28%), Positives = 245/521 (47%), Gaps = 17/521 (3%)

Query: 5   LRPLVFWPTFLILLAAVIASYIDLNAFLAVSKQLNNLILKNFSWLFSAGSFAMVVLTAIV 64
           L P VF+ + +++   V+ +         + +Q+   I+ N SW +      +++    +
Sbjct: 11  LNPPVFYTSAILVFLLVLYATAFQEHAQTLFEQVQRWIITNASWFYILVVALVLISVVFL 70

Query: 65  YFSALGKVRIGGEDAQPLLSKWRWFMVALCTTLAVGVLFWTTAEPLYHLYGPPTSLPIEA 124
             S  G +++G + ++P   K  WF +     + +G++F+  AEP+ H   PP   P   
Sbjct: 71  AVSRYGDIKLGPDHSEPDYRKSSWFAMLFSAGMGIGLMFFGVAEPVMHFSTPPVGDP--- 127

Query: 125 GSSAAKTFAMSTMFLHWTITPYAIYLVPSLVFALVFYNRRSNFSIGAMLEPLLGEARVKR 184
           G+ AA   AM   F HW +  +AIY + +L+ A   +      ++ + L PL+GE     
Sbjct: 128 GTVAAAREAMKITFFHWGLHAWAIYAIVALILAYFSFRNGLPLTLRSALYPLIGERIYGP 187

Query: 185 YAGLIDTLAMFALVAGMASSLGTGALTLAGGLAQYIGGETTPLRLAIIIAIIVITFVASA 244
               +D  A+   V G+A+SLG G L +  G     G         I+I         S 
Sbjct: 188 IGHAVDVFAILGTVFGVATSLGYGVLQINSGFHHVFGLPVNTTVQVILITATCALATLSV 247

Query: 245 ASGLQKGIVMLSSFNTWIMLALGLFVLLCGPTLYMFSLGVESLGVYLDTFFSRSLFTGAA 304
           ASGL KGI +LS  N  + + L LFVLL GPT+++    V++ G YL    +++    A 
Sbjct: 248 ASGLDKGIRILSELNLSLAVILMLFVLLLGPTVFLLQTYVQNTGAYLSDIVNKTFNLYAY 307

Query: 305 SGDTWPHSWTVFYWSVWFAWAPVSALFLGKIGRGYTVREFIHINMLYPALFTAVWICIFS 364
               W   WT+ YW  W +W+P   LF+ +I RG T+REF+   +  PA FT +W+ +F 
Sbjct: 308 EPTDWIGGWTLLYWGWWLSWSPFVGLFIARISRGRTIREFVCGVLFVPAGFTLLWMTVFG 367

Query: 365 GTSLYFDALGDG--SLNRVLNEQGVEHVLYQMFQQLPASGLMIAFLLFVAFISFVTAADS 422
            ++++   L DG   L  V++E      L+   +  P S ++    + +  + FVT+ADS
Sbjct: 368 DSAIHM-ILNDGVKDLAAVVSEDS-SLALFAFLEHFPFSSIISLVAVLMVVVFFVTSADS 425

Query: 423 STDVIANLCSKGVTADSDLDGNPAL--KIVWGVIIGSVSWVMVSFVGIDGVKMLSNLGGL 480
              V+  L S G        G+  L  +I W V IG+V+  ++   G+  ++  +    L
Sbjct: 426 GALVVDMLASSG-------QGHSPLWQRIFWSVCIGAVAIALLLANGLKALQTATIASAL 478

Query: 481 PGMLLVLLASTSLIFWLKNPALLDVKRHQRTPATELHSASP 521
           P  +++L+A   L   L   A     R+Q  P    H+  P
Sbjct: 479 PFAVILLVAIWGLFKALSLDATRRGLRNQALPGPR-HTRHP 518