Pairwise Alignments

Query, 527 a.a., BCCT transporter from Pseudomonas simiae WCS417

Subject, 667 a.a., choline/carnitine/betaine transporter from Pseudomonas putida KT2440

 Score =  231 bits (588), Expect = 8e-65
 Identities = 154/530 (29%), Positives = 256/530 (48%), Gaps = 32/530 (6%)

Query: 2   KYPLRPLVFW--PTFLILLAAVIASYIDLNAFLAVSKQLNNLILKNFSWLFSAGSFAMVV 59
           K  + P VF+   +F+++   V+ S         ++ Q  N       W +       +V
Sbjct: 12  KIRMNPPVFYFAASFILIFGLVVISNPQAAGDWLLAAQ--NWAANTVGWYYMLAMTLYLV 69

Query: 60  LTAIVYFSALGKVRIGGEDAQPLLSKWRWFMVALCTTLAVGVLFWTTAEPLYHLYGPPTS 119
              +   S  GK+++G +  +P  S   W  +     +++ + F+  +EPL H+  PP  
Sbjct: 70  FVVVTALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHMLQPPQG 129

Query: 120 LPIEAGSSAAKTFAMSTMFLHWTITPYAIYLVPSLVFALVFYNRRSNFSIGAMLEPLLGE 179
              EAG+  A   AM  +FLHW +  + ++    +  A   Y      ++ + L PL+G+
Sbjct: 130 ---EAGTVEAGRQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGK 186

Query: 180 ARVKRYAGLIDTLAMFALVAGMASSLGTGALTLAGGLAQYIGGETTPLRLAIIIAIIVIT 239
                    +D   + A V G+ + +G G L L  GL    G   +     I+I +++  
Sbjct: 187 RINGPIGYAVDGFGIIATVFGLGADMGFGVLHLNAGLDYLFGISHSQWVQVILITLMMGA 246

Query: 240 FVASAASGLQKGIVMLSSFNTWIMLALGLFVLLCGPTLYMFSLGVESLGVYLDTFFSRSL 299
            VA A +G++KG+ ++S  N ++  AL LFVL  GPT ++F+  +++LG YL     R  
Sbjct: 247 AVAVAVAGVEKGVRVMSDINLFLACALLLFVLFAGPTQHLFNTLIQNLGDYLGAL-PRKS 305

Query: 300 FTGAASGDT--WPHSWTVFYWSVWFAWAPVSALFLGKIGRGYTVREFIHINMLYPALFTA 357
           F   A G+   W   WTVFYW+ W AWAP   LF+ +I RG T+REF+   +L P  FT 
Sbjct: 306 FDVYAYGENRGWLGGWTVFYWAWWIAWAPFVGLFIARISRGRTIREFVFGVLLIPLGFTL 365

Query: 358 VWICIFSGTSL------YFDALGDGSLNRVLNEQGVEHVLYQMFQQLPASGLMIAFLLFV 411
            W+ IF  ++L         ALG  +L+           LY + +  P S  +IA  +F+
Sbjct: 366 AWMSIFGNSALDQVINHGMTALGQSALD------NPSMSLYLLLETYPWSKAVIATTVFI 419

Query: 412 AFISFVTAADSSTDVIANLCSKGVTADSDLDGNPALKIVWGVIIGSVSWVMVSFVGIDGV 471
           +F+ FVT+ADS T V++ L +KG   D+D DG   L+I WG +   ++  ++    ID +
Sbjct: 420 SFVFFVTSADSGTVVLSTLSAKG--GDADEDGPNWLRIFWGAMTALITSALLFAGSIDSL 477

Query: 472 KMLSNLGGLPGMLLVLLASTSLIFWLKNPALLDVKRHQRTPATELHSASP 521
           K    L  LP  L++L     +++ L     L+ +R       ++HS +P
Sbjct: 478 KSAVVLTSLPFSLILL----CMMWGLHKAFYLESQRQ----IAQMHSLAP 519