Pairwise Alignments

Query, 306 a.a., recombinase RdgC from Pseudomonas simiae WCS417

Subject, 303 a.a., recombination associated protein (NCBI) from Escherichia coli BW25113

 Score =  263 bits (672), Expect = 4e-75
 Identities = 135/300 (45%), Positives = 197/300 (65%), Gaps = 1/300 (0%)

Query: 1   MWFKNLLIYRLTQDLPVDAEALEAAMATKLARPCASQELTTYGFVAPFGKGEDAPLVHVS 60
           +WFKNL++YRL++++ + AE +E  +A+    PC SQ++   G+V P G   DA L HV+
Sbjct: 2   LWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDA-LTHVA 60

Query: 61  GDFLLIAARKEERILPGSVVRDALKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF 120
              ++I ARKEE+ILP  V++ AL+ K+ ++EAEQ RK+ K E+D +KDE++ + LPRAF
Sbjct: 61  NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF 120

Query: 121 IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAIMTDWV 180
            R S T   I    GLI+V+ AS K+AED L+ LR+ +G+LPV PL+++      +T+WV
Sbjct: 121 SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV 180

Query: 181 TTQKPADDFFVLDECELRDTHEDGGIVRCKRQDLTGEEIQLHLTTGKVVTQLSLAWQDKL 240
            +   A  F +LDE EL+   EDGG++R K+QDLT EEI  H+  GKVVT+L+L WQ ++
Sbjct: 181 RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI 240

Query: 241 SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFIPALVEALGGE 300
            F++ D  ++KRLKF D L+DQ E    ++   + DA F LM       I  L+E LGGE
Sbjct: 241 QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE 300