Pairwise Alignments

Query, 259 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 259 a.a., putative ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  459 bits (1181), Expect = e-134
 Identities = 230/258 (89%), Positives = 243/258 (94%)

Query: 1   MSSELQPNLVALQTIVYREVKRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFT 60
           MS EL+ N VAL TIVYREV+RF RIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFT
Sbjct: 1   MSVELRTNWVALNTIVYREVRRFLRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFT 60

Query: 61  YMEYIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTLGGVLRG 120
           YM+YIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTIL+GY LGGVLRG
Sbjct: 61  YMQYIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILVGYVLGGVLRG 120

Query: 121 LMVGVIVTLLSLFFTHLQVHHLGVTILVVVLTATIFSLLGFINAVFARNFDDISIIPTFV 180
           L VGVIVT+LS+FFT LQVHHLGVT+ VV+LTATIFSLLGF+NAVFARNFDDISIIPTFV
Sbjct: 121 LAVGVIVTILSMFFTDLQVHHLGVTVAVVLLTATIFSLLGFVNAVFARNFDDISIIPTFV 180

Query: 181 LTPLTYLGGVFYSISLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIKISVAITFMLVAT 240
           LTPLTYLGGVFYSI+LLPPFWQTVSLANPVLHMVN+FRYGILGVSDI I  AITFMLVAT
Sbjct: 181 LTPLTYLGGVFYSINLLPPFWQTVSLANPVLHMVNSFRYGILGVSDISIGTAITFMLVAT 240

Query: 241 VVLYIGCAKLLVSGRGMR 258
            VLY+ C +LLVSGRGMR
Sbjct: 241 AVLYVVCVRLLVSGRGMR 258