Pairwise Alignments

Query, 310 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 314 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  150 bits (378), Expect = 5e-41
 Identities = 97/310 (31%), Positives = 161/310 (51%), Gaps = 24/310 (7%)

Query: 7   IRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVNIFG 66
           + +L K YG     +  +  ++A G+   ++GPNGAGK+TTI +   L     G ++  G
Sbjct: 14  VSRLRKRYGET-TVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGEISALG 72

Query: 67  HDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQLGL 126
             + +   A+K  +GVV Q    +      + +V    Y+G      + R  Q L    L
Sbjct: 73  LQMPRDALAIKAQLGVVSQFDTLDPDFSCAENLVVYGRYFGFGKAQVRARVPQLLEFAAL 132

Query: 127 WDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELNEKG 186
             K D     LSGGM+RRL +ARALV++P+LL+LDEPT G+D + R  MW  L  L ++G
Sbjct: 133 SHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERLQVLLQQG 192

Query: 187 ITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNN----LSA 242
            +I+LTTH+++EAE+LC  + ++DHG  +     R+L+ + H+E  ++++  N    L+ 
Sbjct: 193 KSILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAE-HLEPDVVEVYGNGALSLAE 251

Query: 243 PPQLLGYPSRLVDSHTLEVQVDKAMGITALF-TQLATQNIEVLSLR------NKTNRLEE 295
             +L    +R+           +  G T  F TQ A + +E L+        ++   LE+
Sbjct: 252 SAELKAMAARV-----------EVSGETVFFYTQDARRLLEALTRHGGLRTFHRPANLED 300

Query: 296 LFVSLVEKNL 305
           LF+ L  + +
Sbjct: 301 LFLKLTGRQI 310