Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 7e-28
 Identities = 106/376 (28%), Positives = 180/376 (47%), Gaps = 44/376 (11%)

Query: 148 IGQAMDLPPAAWEH-IKTHGFFALI---IPKEYGGKGFSAYAHSQVAMKLATRSGDLAST 203
           + Q MD      EH I+  G   L+   +P+EYGG G      + +A +L  R     + 
Sbjct: 26  LAQQMDEEEKFPEHLIRIFGDMGLMQARVPEEYGGPGLDLTT-TCMAKELVARVSMTGAQ 84

Query: 204 VMVPNSLGPAELLLHYGTEEQRNHYLPRLARGDDIPCFALTGPLAGSDAGAMPDTGVICK 263
           ++  N++     LLH+GT+EQR  +LPR+A+G  +   A+T P AGSD GAM    V   
Sbjct: 85  LINQNTISFVLPLLHFGTDEQRRKWLPRVAKGGVVSSVAITEPHAGSDVGAMKTNAV--- 141

Query: 264 GEWEGKETLGLRLNWEKRYITLGPVATLLGLAFKAHDPDHLLGEEEDLG---ISLALIPT 320
                +E     +N +K +IT+ P+A  + L  K        GE    G   IS  ++  
Sbjct: 142 -----REGDHYVVNGQKCFITMAPLADYITLFAKT-------GEVNRRGVDNISCFIVDM 189

Query: 321 DTPGVEIGRRHLPLGAAFMNGPNAG---KDVFIPLEFLIGGQEMLGKGWMMLMNCLSVGR 377
            + G+ +G     +G      P+A     +V +P+E  +G +   G+G++  M+ L + R
Sbjct: 190 KSAGITLGGSEKMMGQ--RGTPHADIFFDNVRVPVENRMGEE---GRGFISCMHILDLNR 244

Query: 378 -SISLPAVGTGAAKFTSLVTGQYAQVREQFNVPLSAFEGIQEALARIGGNAWLMDSARML 436
            +++  AVG     F   V   YA+ R+ F   +  F+G+Q  LA +      +++AR L
Sbjct: 245 PTVAASAVGVAQGAFDIAVA--YAKERKAFGKAIGEFQGLQFMLADMHIQ---IEAARAL 299

Query: 437 ---TANAVDLG--EKPSVLSAILKYHLTERGRECISHAMDVHGGKGIIMGPNNYLGRNWQ 491
                 A+D G  ++ + +++++K   T+   +  + A+ V GG G I G  N++ R  +
Sbjct: 300 LYKCTRAIDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRG--NHVERMMR 357

Query: 492 GAPIFITVEGANILSR 507
            A +    EG N + R
Sbjct: 358 DAKVLQIYEGTNQIQR 373