Pairwise Alignments

Query, 655 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  402 bits (1032), Expect = e-116
 Identities = 250/657 (38%), Positives = 385/657 (58%), Gaps = 21/657 (3%)

Query: 1   MISAVQRQFANLGMAKKLGLGFTLVLLLTALIAAIGVWSLQTIGQRFEGLKAMSSLNSGL 60
           M   + +   N+ + +KLGLGF LVLLLT  I   G   + +I  R + L  +S +    
Sbjct: 1   MYQWLAQSLGNVSVNRKLGLGFGLVLLLTLAITLTGWHGMDSIIDRGDKLGNISVIQQYT 60

Query: 61  LKVRLIEQDYALHADPKAVDALHESVDALAALAASLKAQ--SAANVPVMTDVEEALAAYR 118
            ++R+  Q Y    D  ++  L +++  L      +  Q    A+   +    EA+  Y+
Sbjct: 61  QELRIARQQYDRRRDDASLAELEKALSNLDRQVQLMLGQIEQPADHQRLEQQREAVRIYQ 120

Query: 119 KAFDEFVELTQTKDLALEMASWSVSSVANNLDVLQAGLADDGAYGLKESQGKEGAEFIEQ 178
           +AF+E  +  Q ++ + ++   S     + +  +Q  L              +GA  I Q
Sbjct: 121 QAFNELKQADQRREASRDVLGSSADKAVDLIGRVQRSLL-------------QGAN-INQ 166

Query: 179 AGQVSQVSRLMLQAMNEAHVRLNQSRKVDEDTSEQGKIEQADQALAQVEQLKTSVKDSGY 238
                 VS L+ QA  +       S   D    +Q  ++  DQALA++  L   V  + +
Sbjct: 167 YQHAVDVSALLQQARFQVR-GYTYSGNADY---QQTALKAIDQALAELRALPAKVP-AEH 221

Query: 239 QTVLNEVAGHIAAFSEKLGEYTGLLAQEKVVYKQLHDRADQVVSRVNQAYGAEDQSMQAQ 298
              L++ A  +  + + + ++       +   +++ ++   ++        ++ +   A 
Sbjct: 222 AASLDDAATAMGGYRDAVTQFGNAQLASEQALQRMVEQGTVLLQASQMMTASQTEVRDAA 281

Query: 299 LKKSSMLILGSSALALLVGLIAAWVITRLIVAPLRSVIAVAQQIAAGDLSGRMEVNRRDE 358
             ++  L+  ++ LAL +GL+AAW ITR I+ PLR  +  A+++A+GDL+  ++V RRDE
Sbjct: 282 AAQAKTLLTVATVLALALGLLAAWAITRQIIIPLRQTLRAAERVASGDLTQSLQVQRRDE 341

Query: 359 IGQLMQAMQQMGNGLSQMVSGLQAGIEQLASSAHSLSSVTEQTNVEVSSQKEETEQVATA 418
           +GQL  +M +M  GL +++ G+  G+ Q+AS+A  LS+VTEQT+  V++QK ET+QVATA
Sbjct: 342 LGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQVATA 401

Query: 419 MNQMTATVHDVARNAEEAAQAAQTADEKVDSGQRVVRQSLQRIELLATSSSSASASIESL 478
           MNQMTATVH+VARNAE+A++AA  AD++   G RVV +++ +IE LA+   ++S ++  L
Sbjct: 402 MNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSEAMNLL 461

Query: 479 SAEIQHIGSVLSVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTQHST 538
             E   IGSVL VIKSVA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RTQ ST
Sbjct: 462 KTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQST 521

Query: 539 EEIERLVSTLRSAAQSSVQQIQQSGELVKLAVSDALETESALGSIAVAVSLIQQMNQQIA 598
           EEIE L++ L+S  Q     +  S +L   +V       S+L +I   VS IQ MNQQIA
Sbjct: 522 EEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQQIA 581

Query: 599 AAAEEQSSVAEEINRSVTSIRASADQSALSMQGNAASSIQLAQLGAELKGMVGHFRL 655
            AAEEQ++VAEEINRSV ++R  +DQ++ + +  A+SS++LA+LG  L+G+VG FRL
Sbjct: 582 TAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRFRL 638