Pairwise Alignments

Query, 254 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 1e-63
 Identities = 122/228 (53%), Positives = 156/228 (68%), Gaps = 7/228 (3%)

Query: 28  LIVDDDVPIRELLIDYLARFGILATGVTDGTAMRQAMQAETFDVVVLDLMLPGEDGLSLC 87
           +IVDDD  IREL+ +YL + G+  T   DG  MR  + +   D++VLD+M+PG+DGL LC
Sbjct: 8   MIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLVLC 67

Query: 88  RWLRA--ESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDD 145
           R LRA      PILMLTAR + TDRIIGLE+GADDY+ KPF  REL+ARI  +LRR R  
Sbjct: 68  RELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRSL 127

Query: 146 R-----TEQRANIRFDNWRLNSVLRQLVADNGLVVPLSNAEFRLLWVFIERPRRVLSREQ 200
                 +E    + F  WRL++  R L+   G VV LS  E+RLL VF++ P+RVLSR+Q
Sbjct: 128 PPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVLSRDQ 187

Query: 201 LLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKAPHLIKTVRGEGYLF 248
           LL+  +GR  + FDRSIDLLVSRLRQ+L DD + P  +KTVR EGY+F
Sbjct: 188 LLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVF 235