Pairwise Alignments

Query, 353 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  587 bits (1514), Expect = e-172
 Identities = 285/345 (82%), Positives = 313/345 (90%)

Query: 1   MLNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAA 60
           M+NNDRLLVQILL+ L GA  WVMAPF SAL WGA+LAFASWPLM  LTR LGGRE+LAA
Sbjct: 1   MVNNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAA 60

Query: 61  GILTLGWMLLVALPLVWLGFNLADHVRDATALIKDIQVDGLPEAPTWLGSIPFVGERLVA 120
           G+LT+ W+L+VALPLVWLGFNLADH+RDATA ++D+QVDGLP+AP WLG IPFVGERLV 
Sbjct: 61  GLLTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVN 120

Query: 121 MWDSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVFFFYRDGPRLAM 180
            W S+DQ+GAAL+ SIKPY GQVGNWLLARSAQIG G+LELTLSLVFVFFFYRDGPRLA 
Sbjct: 121 GWQSLDQKGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVFFFYRDGPRLAA 180

Query: 181 FVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGALVLGI 240
           FV RLL RL+G+RA YY++LVA TVQRVVNGVIGTAAAQALLALIGFLIAGVPGA+VLG+
Sbjct: 181 FVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGL 240

Query: 241 VTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLISRGGN 300
           VTF+LSLIPMGPPL WIPATAWL WKG+Y  AVFLGVWGTF+ISGVDNVLKPYLISRGGN
Sbjct: 241 VTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGN 300

Query: 301 LPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDWSATHAQ 345
           LPLVIVLLGVFGGL+AFGFIGLFIGPTLLAV YSLL+DWS   AQ
Sbjct: 301 LPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQ 345