Pairwise Alignments

Query, 353 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 6e-34
 Identities = 99/351 (28%), Positives = 155/351 (44%), Gaps = 20/351 (5%)

Query: 2   LNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAG 61
           L N  L V + L+ +  A FW++ P++ A+FW  +L     PL   L    G R +LAA 
Sbjct: 6   LQNKALAVLLALVTI--AFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAA 63

Query: 62  ILTLGWMLLVALPLVWLGFNLADHVRDATALIKDIQVDGLPEAPTWLGSIPFVGERLVAM 121
             TL  +L+  LP++ +   L          I+  Q+D           +P   +R    
Sbjct: 64  TSTLVCLLVAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQR---- 119

Query: 122 WDSIDQQGAA----LMVSIKPYLGQVGNWLLARSAQIGGGILELTLS----LVFVFFFYR 173
              +D  G      L   I  +  Q    L +++   G G  E  +S    +  +FFF R
Sbjct: 120 --GLDNMGMGNLDGLRDKITKWATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLR 177

Query: 174 DGPRLAMFVHRLLERLIGDRAGYYIELVAGTVQRV-VNGVIGTAAAQALLALIGFLIAGV 232
           DGP +A  V   +   + +     ++L    V R  V G +  A  Q  L    F +  +
Sbjct: 178 DGPEVARRVRMAVP--LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDI 235

Query: 233 PGALVLGIVTFLLSLIP-MGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLK 291
           P ALV  ++   LSL+P +G  ++W P  A+    G     V L  +G  +I  VDNVL+
Sbjct: 236 PSALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLR 295

Query: 292 PYLISRGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDWSAT 342
           P L+ +   +P  ++L+   GGL  FG  G  IGP + A+  S    ++AT
Sbjct: 296 PILVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIFAAT 346