Pairwise Alignments

Query, 411 a.a., integrase from Pseudomonas simiae WCS417

Subject, 419 a.a., tyrosine-type recombinase/integrase from Pectobacterium carotovorum WPP14

 Score =  228 bits (582), Expect = 2e-64
 Identities = 146/403 (36%), Positives = 208/403 (51%), Gaps = 21/403 (5%)

Query: 10  PLADTTLAGLEPEHATYREQDGNGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPEIS 69
           PL DT +   +P    Y+  D  GLY  +KPNG K W L+Y+   GK   L  G YP +S
Sbjct: 2   PLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRF-GGKEKKLAFGAYPTVS 60

Query: 70  GSLARQKAAQLREDASTGKNPLVSKQARKVADQVAANNTFEALGREWFEARRTSWESGTS 129
            + AR+   + R   S G +P V KQ  K A +    NTFEA+ R+W  A    W    +
Sbjct: 61  LASARKLREEARTILSAGDDPGVKKQHDKQAKK--NGNTFEAVARQWVGAN-IRWSEAHA 117

Query: 130 RRVLGALELHVFPVFGKRVYTEILPLEWMEFLRGMEQKGIIEQMGRVRAFCKEIYDLARV 189
            +VL +LELHVFP+ G  + T++     +  LR  E+KG +E   R++     I   A  
Sbjct: 118 AKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ 177

Query: 190 TGRAVHNPLEGLSKFLQSRSAENYAHVSIEELPALLRAINSYPHAKDVRIGLRLLSLLAS 249
            G    NP   L   +      +Y  + +E+LP LL  I  Y      R+ ++L  L+  
Sbjct: 178 EGLIASNPANDLCGAITPPPKNHYPALPLEKLPELLERIEGYSGRLLTRLAVQLNLLIFI 237

Query: 250 RPSEIREARWSEIDLTKKLWTIPAER------------MKRRREHVVPLSRQSIEALTEL 297
           R SE+R ARW EIDL   +WT+PA+R             K +  H+VPLS+Q++  L +L
Sbjct: 238 RSSELRFARWVEIDLDNAMWTLPAQREPIAGVRHSERGAKMKTPHLVPLSKQAVTVLKQL 297

Query: 298 RTLTGAYPLLFPGRKDRTIPRSNTVFLMALRRLGYAGRQ--TGHGFRHIASTILNEQG-F 354
           + L+G   LLFPG  D   P S      ALR +GY  +    GHGFR IA + L E G +
Sbjct: 298 KLLSGNGELLFPGDHDARKPMSENTINKALRTMGYDTQVDICGHGFRTIACSALIESGRW 357

Query: 355 DENHIEAQLSHAKEG--IAGVYNKAVYLPQRRVMMQWYADHLD 395
            ++ +E Q+SH +     A   +KA +L +R  MMQW++D+LD
Sbjct: 358 SKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLD 400