Pairwise Alignments

Query, 411 a.a., integrase from Pseudomonas simiae WCS417

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  222 bits (565), Expect = 2e-62
 Identities = 139/417 (33%), Positives = 215/417 (51%), Gaps = 22/417 (5%)

Query: 11  LADTTLAGLEPEHATYREQDGNGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPEISG 70
           L D+ +  L+     ++  D +GLY  + P G + W L+Y+  + K S LGLG YP++S 
Sbjct: 3   LNDSKIRNLKSLAKPFKVSDSHGLYLLINPGGSRLWYLKYRI-NKKESRLGLGTYPDVSL 61

Query: 71  SLARQKAAQLREDASTGKNPLVSKQARKVADQVAANNTFEALGREWFEARRTSWESGTSR 130
           + ARQ+   +R+  +   NP   + A +     +   TF+ +   W ++ RT W    + 
Sbjct: 62  ADARQQRDGIRKLLAQNINPAQQRSAERTTS--SPEKTFKTVALSWHKSNRT-WSENHAT 118

Query: 131 RVLGALELHVFPVFGKRVYTEILPLEWMEFLRGMEQKGIIEQMGRVRAFCKEIYDLARVT 190
           R+L ++  H+FPV G +  TE+ P  ++E L+G+E+KG++E   R R     I   A   
Sbjct: 119 RLLASMNNHIFPVIGHQPVTELKPRHFIELLKGIEKKGLLEVAARTRQHLCNIMRHAVHQ 178

Query: 191 GRAVHNPLEGLSKFLQSRSAENYAHVSIEELPALLRAINSYPHAKDV-RIGLRLLSLLAS 249
               HNP   L   + +    +Y  + +E+LP LL  I  Y   +++ R+ + L   L  
Sbjct: 179 ELIEHNPAANLDGIIATPVKRHYPALPLEQLPELLTRIEGYRQGRELTRLAVLLTLHLFI 238

Query: 250 RPSEIREARWSEIDLTKKLWTIPAER------------MKRRREHVVPLSRQSIEALTEL 297
           R SE+R ARWSEID    +WTIPA R             K R  H+VPLSRQ+I  L ++
Sbjct: 239 RSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQAIAILKQI 298

Query: 298 RTLTGAYPLLFPGRKDRTIPRSNTVFLMALRRLGYAGRQT--GHGFRHIASTILNEQG-F 354
           R ++G   L+FPG  +   P        ALR +GY  +    GHGFR +A + L E G +
Sbjct: 299 REISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTQNNICGHGFRAMACSALMESGLW 358

Query: 355 DENHIEAQLSHAKEGI--AGVYNKAVYLPQRRVMMQWYADHLDELVEGNIVQGHFGR 409
            ++ +E Q+SH +     A    KA YL  R+ MMQW++D+LD   EG +    + R
Sbjct: 359 SQDAVERQMSHQERNSVRAAYIQKAEYLDARKAMMQWWSDYLDMTREGYVAPYVYAR 415