Pairwise Alignments

Query, 411 a.a., integrase from Pseudomonas simiae WCS417

Subject, 422 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  218 bits (556), Expect = 2e-61
 Identities = 140/419 (33%), Positives = 214/419 (51%), Gaps = 20/419 (4%)

Query: 11  LADTTLAGLEPEHATYREQDGNGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPEISG 70
           L D      +P    Y+  D +GLY  V PNG K W L+Y+  DGK S +  G YP IS 
Sbjct: 3   LTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRF-DGKESRIAFGAYPLISL 61

Query: 71  SLARQKAAQLREDASTGKNPLVSKQARKVADQVAANNTFEALGREWFE-ARRTSWESGTS 129
           + AR+K  ++R   S G +P   ++  K   Q A N TFE + R+W     +  W    +
Sbjct: 62  AKAREKRDEVRLLLSEGIHPTEKREEEKEQAQDALN-TFEKVARDWHRNISQNRWSQTHA 120

Query: 130 RRVLGALELHVFPVFGKRVYTEILPLEWMEFLRGMEQKGIIEQMGRVRAFCKEIYDLARV 189
            RV   +E ++ P  G+R   ++   + +E L+ +EQ G ++   R+R    +I   A  
Sbjct: 121 GRVWRDMERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRITDIMRYAVQ 180

Query: 190 TGRAVHNPLEGLSKFLQSRSAENYAHVSIEELPALLRAINSYPHAKDVRIGLRLLSLLAS 249
                 NP + L+  + +  A +   + +++LP  L  I  Y      R+ L+L   +  
Sbjct: 181 NDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLARIERYKGRALTRLALKLTLCVFI 240

Query: 250 RPSEIREARWSEIDLTKKLWTIPAER------------MKRRREHVVPLSRQSIEALTEL 297
           R SE+R ARW EID  + +WTIP ER             K R EH+VPLSRQ++  L E+
Sbjct: 241 RSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEEI 300

Query: 298 RTLTGAYPLLFPGRKDRTIPRSNTVFLMALRRLGY--AGRQTGHGFRHIASTILNEQG-F 354
           + ++G + L+FPG    T P S      ALR +GY       GHGFR +A + L E G +
Sbjct: 301 KAISGVHELIFPGDHRPTKPMSENTINSALRTMGYDTTTEVCGHGFRTMACSALVESGQW 360

Query: 355 DENHIEAQLSH-AKEGIAGVY-NKAVYLPQRRVMMQWYADHLDELVEGNIVQGHFGRAG 411
             + +E Q+SH  + G+   Y +KA +L +R++M+QW+AD+LD   E ++V   F   G
Sbjct: 361 SRDAVERQMSHQERNGVRAAYIHKAEHLEERKLMLQWWADYLDANREEHVVPYEFINRG 419