Pairwise Alignments

Query, 262 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 235 a.a., VacJ lipoprotein from Pseudomonas putida KT2440

 Score =  145 bits (365), Expect = 1e-39
 Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 5/198 (2%)

Query: 65  DPLESWNRRVYHFNYRFDQWVFLPVVNGYTYVTPSFLRTGVSNFFNNLGDVPNLLNSLLQ 124
           DP E+ NR ++ FN   D +   P+  GY  VTP FL  G+ N F NLGDV NL N++LQ
Sbjct: 36  DPWEAVNRPIFRFNDTLDTYALKPLAKGYQAVTPQFLEDGIHNIFRNLGDVTNLANNVLQ 95

Query: 125 LKGHRSLETTGRLLVNTTIGIAGLWDPATAMGLPRQSEDFGQTLGFYGVPGGAYLVLPIF 184
           LK H +   T RL+VNTT G+ G +D  T MGL R  EDFGQTLG++GVP G Y+V+P+ 
Sbjct: 96  LKPHAAGVDTARLIVNTTFGLGGFFDVGTKMGLQRNDEDFGQTLGYWGVPSGPYVVIPLL 155

Query: 185 GPSNLRDTGGLIVDYGAETQINFLNVSEVSSNHPEIWALRAVDKRYQTSFRYGQMNSPFE 244
           GPS +RD    +  Y       +  +  V + +  I+AL  +D R  +     ++    +
Sbjct: 156 GPSTVRDG---VAKYPDTYTKPYRYIDHVPTRN-SIFALDLIDTR-ASLLSAEKLIQGDK 210

Query: 245 YEKVRYIYTESRKLQIAE 262
           Y  +R  Y ++R+ ++ +
Sbjct: 211 YIFIRNAYLQNREFKVKD 228