Pairwise Alignments

Query, 304 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 304 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

 Score =  454 bits (1167), Expect = e-132
 Identities = 233/303 (76%), Positives = 261/303 (86%), Gaps = 2/303 (0%)

Query: 1   MAGSSLLVLIDDIAAVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWA 60
           MAGSSLLVLIDDIA +LDDV+LMTK+AAKKTAGVLGDDLALNAQQV+GVRA+RE+PVVWA
Sbjct: 1   MAGSSLLVLIDDIATLLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVRADRELPVVWA 60

Query: 61  VAKGSFVNKLILVPTALLISAFAPWAVTPLLMLGGAYLCFEGFEKLAHKFLHSKVEDHAE 120
           VAKGSFVNK ILVP ALLISAF PWAVTPLLMLGGA+LCFEGFEKLAHKFLHSK ED A+
Sbjct: 61  VAKGSFVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKFLHSKEEDEAQ 120

Query: 121 HAQLVKAVADPAIDLVAFEKDKIKGAIRTDFILSAEIIAITLGTVADAPLTQQVIVLSGI 180
           H    +AVAD ++DLVAFEK KIKGA+RTDFILSAEIIAITLG VAD+PLTQQ+IVLSGI
Sbjct: 121 HEARKEAVADASVDLVAFEKAKIKGAVRTDFILSAEIIAITLGIVADSPLTQQIIVLSGI 180

Query: 181 AIVMTVGVYGLVAGIVKLDDLGLWLTQKPGQAARSIGGAILRAAPYMMKSLSVIGTAAMF 240
           A+VMT+GVYGLV GIVKLDDLGLW+ +K  +  +++G  ILRAAPYMMKSLSVIGTAAMF
Sbjct: 181 AVVMTIGVYGLVGGIVKLDDLGLWMARKTSRLIQAVGNGILRAAPYMMKSLSVIGTAAMF 240

Query: 241 LVGGGILTHGLPVVHHWIETVSQSAGGVAWLVPTLLNGVAGIIAGAVVLAVVSGVGKLWN 300
           LVGGGIL HG+  +HH IE  S+  GG   L   LLNG  G++AGAVVLAVVS  GKLW 
Sbjct: 241 LVGGGILVHGIEPLHHAIEAFSEGRGGA--LTSALLNGGVGVLAGAVVLAVVSVAGKLWR 298

Query: 301 TAK 303
             +
Sbjct: 299 AVR 301