Pairwise Alignments

Query, 384 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 424 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 83/375 (22%), Positives = 156/375 (41%), Gaps = 16/375 (4%)

Query: 11  AIVANIYYAQPIIELIAPDIGLTPAMASLIVSLTQIGYALGLFFLVPLGDLLENRKLMIA 70
           A  A +Y  QP++  ++ +  +  A +SLI+S++    ALGL    P+ D L  + +M+A
Sbjct: 49  ATFALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLITGPISDTLGRKPVMVA 108

Query: 71  TTVLAIASLLGAAFTEQPNLFLLVSLLIG--FSSVSVQILIPLAAHLAPAESRGRVVGSI 128
               A  + + +         L +  L+G   S ++   +  L+  + P +  G  +G  
Sbjct: 109 ALFCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHP-QHIGLAMGLY 167

Query: 129 MGGLLLGILLARPVSSVVADHFGWRAMFMAAAALMALISVVLLITIPKRQPDHSATY--G 186
           +GG  +G +  R +  V+ D   W    +   AL  + + V    +P+ +   +++    
Sbjct: 168 IGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVFWKILPESRNFRASSLKPR 227

Query: 187 QLLRSLGTLLREQ--PVLRQRAFYQGCMFATFSLFWTAAPLELARNHGLSQSEIALFALV 244
            L+ S     ++   P L   AF    M A  ++F       LA  + LSQ+ + L +LV
Sbjct: 228 SLVDSFVMHFKDAGLPWLFLEAFL--LMGAFVTMFNYIGYRLLADPYDLSQAVVGLLSLV 285

Query: 245 GALGAIAAPVAGRLADAGHTHRASLLAMLFAALSFLPAFVHPLYSVIG--LAVTGVVLDF 302
              G  ++   G LAD     R     ++      L     PL+ V+   L  T      
Sbjct: 286 YLSGIYSSAKIGSLADRLGRRRVLWATIVLMLAGMLLTLFSPLWLVVPGMLIFTFGFFGA 345

Query: 303 CVQMNMVLGQRAIYALDANSRSRLNALYMTSIFIGGAFGSAIASSVYEHGGWLGVMLVGS 362
               +  +G+RA+ A     + + ++LY+   ++G +         +   GW G+     
Sbjct: 346 HSVASSWIGRRAVKA-----KGQASSLYLFCYYVGSSIAGTAGGFFWHFAGWNGIGAFIV 400

Query: 363 AFPLIALLRFLSASR 377
           A  + ALL  L  ++
Sbjct: 401 ALLMGALLVALKLAK 415



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 20/171 (11%)

Query: 213 FATFSLFWTAAPLELARNHGLS----QSEIALFALVGALGAIAAPVAGRLADAGHTHRAS 268
           FATF+L +   P+  A +H  S    QS + L ++  A+ A+   + G ++D        
Sbjct: 48  FATFALLYCVQPMMPALSHEFSINAAQSSLIL-SVSTAMLALGLLITGPISDTLGRKPVM 106

Query: 269 LLAMLFAALSFLPAFVHP-------LYSVIGLAVTGVVLDFCVQMNMVLGQRAIYALDAN 321
           + A+  AA + + + + P       + +++GL+++G+       ++  +  + I      
Sbjct: 107 VAALFCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHPQHI------ 160

Query: 322 SRSRLNALYMTSIFIGGAFGSAIASSVYEHGGWLGVMLVGSAFPLIALLRF 372
                  LY+    IGG  G  I   + +   W   ML+  A  LIA   F
Sbjct: 161 --GLAMGLYIGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVF 209