Pairwise Alignments

Query, 525 a.a., flagellar hook-length control protein FliK from Pseudomonas simiae WCS417

Subject, 518 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  540 bits (1390), Expect = e-158
 Identities = 285/505 (56%), Positives = 368/505 (72%), Gaps = 6/505 (1%)

Query: 21  APVAGELLKLLEPQIGLIDPGKTANAEVIALKQGGEAFQLLLKLTLEGGRQTLVQASSPQ 80
           A + G+LL+L++ Q GL+ PG+TA AEV++L+Q G+ FQL+L+L    G QT +QA++ Q
Sbjct: 20  AGMTGDLLRLIQAQPGLLAPGETAQAEVLSLRQTGQDFQLVLRLMQANGVQTQLQANASQ 79

Query: 81  PLPLGSNVAVSQTPTGNLTLSLQQALSANVAALTRIDTDQMPVGTLLQAKVLTTQMLPQG 140
           PLP GS + VSQT +  L + LQQA ++ VA LT++DT ++PVGTLLQ KVLT Q+L Q 
Sbjct: 80  PLPQGSQITVSQTESNRLAIMLQQASASQVATLTQLDTSKVPVGTLLQGKVLTNQLLAQA 139

Query: 141 TAQPAIYRSLVTVLNSALAGATLSVESPQPLRVGSLLSAVVQNTQTLSFVPLSGLKDQLA 200
             QPA+YR+LV++LNS  AGATLS++SP+PL +GSLLSA+VQ  Q+L FVPLSG +DQL+
Sbjct: 140 PGQPAVYRALVSLLNSNQAGATLSIDSPRPLVIGSLLSALVQGDQSLRFVPLSGRQDQLS 199

Query: 201 VTQQLSTQQSRQGSLDAVFTALQNLPRGDTTSAELRGAAERLLAALPDLAQVSNPKVLAQ 260
           + QQL TQQ+RQ SL  +  ALQ L R      +LR +AERLLA+LPD  Q+ + K +AQ
Sbjct: 200 IAQQLLTQQNRQASLPGLLNALQQLTRDPGVDGDLRASAERLLASLPDARQLGDAKAVAQ 259

Query: 261 VIQNSGAFLEAKLLAGQNPQIPPLDMKGALLRLVADLLPALPANTNMNAILAANTLAQVL 320
            + NSG+FLEAKLL+G    +   D+K  LLRL+A   PALPA+T   A L   +LA  +
Sbjct: 260 ALNNSGSFLEAKLLSGSTASV-ATDLKAHLLRLMAQ-APALPAST---ANLNPASLAVTM 314

Query: 321 PNFVRSPLNTLGQVSARQMPAGFPLPERLMAKLEGEGDLENLLRLAAGAISRLQSHQLSS 380
           P   RS L  L +VS +  P  FPLP RL+  LE EGDL+ LLRLAA A+SRLQSH +SS
Sbjct: 315 PALARSALGMLERVSPKPQPGAFPLPSRLLKALEEEGDLQQLLRLAAAAVSRLQSHAMSS 374

Query: 381 LEQTGTTADGRLQTTWQLEIPMRTLQDIVPLQVKFQREEPAPDKDQPDRKEKKDAKQMLW 440
           L+QTGT  +G LQTTWQ E+P+R  QD +PLQVK QREE  P +    + E +D +Q LW
Sbjct: 375 LQQTGTLENGNLQTTWQTEVPIRHGQDFIPLQVKLQREE-TPQQQADRQHEAQDPRQALW 433

Query: 441 RVELAFDMEPLGPLQVQAQLSQGKLSSQLWASRPFTASLIESHLGNLRERLVTSGINVGD 500
           R+ELAFD+ PLGPLQVQAQLS+G+LS QLWA R  TA LI++ LG LR RL+  G+ VGD
Sbjct: 434 RIELAFDLSPLGPLQVQAQLSEGRLSGQLWAEREQTARLIDTQLGALRARLLARGLEVGD 493

Query: 501 LDCHLGTPPRGPKTGLEQRWVDETA 525
           L+CH G PP+GP+T +EQRWVDETA
Sbjct: 494 LECHPGIPPQGPRTRMEQRWVDETA 518