Pairwise Alignments

Query, 436 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 456 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

 Score =  218 bits (554), Expect = 4e-61
 Identities = 163/445 (36%), Positives = 226/445 (50%), Gaps = 40/445 (8%)

Query: 1   MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAT 60
           ++ R  A  AL AVL   A+L  +L      +E RDR     +     R    L  +   
Sbjct: 27  LSARAVAVDALEAVLRQGAALEEALDGPA--LEPRDRALAYRIVATALRRLGTLRTVLGK 84

Query: 61  LLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCA--DKLKKPWAKALLNAVL 118
           L+++ F  +   +E++LL G  Q+L+  VP+HAA+G +V  A  D+    +A  L+NAVL
Sbjct: 85  LMERGFPKSAPRLESVLLAGATQILFMDVPSHAAVGLSVDLARADRSTVGFA-GLVNAVL 143

Query: 119 RRAQRESEALLAELEHDPVVRTAHPRWL-QKSLKAFWPEQWEAICAANNAHPPMILRVNR 177
           RR  RE EAL+A ++ D       P WL Q+ +KA+  E   A+   +   PP+ + V  
Sbjct: 144 RRVAREGEALMAGVDPD---FADTPDWLRQRWIKAYGAETARAMATMHRVEPPLDITVKT 200

Query: 178 RHHSRDAYLQLLTDAGIGATPCVYSVDGIVLEAATDVRSLPGFAEGWISVQDEAAQLAAD 237
              S    L          +  V     + +  A  VR+LPGFAEG   VQD AA L A 
Sbjct: 201 DPESWAGKL----------SGEVLPTGTVRILQAGPVRALPGFAEGEWWVQDAAAALPAR 250

Query: 238 LLDLAPGQRVLDACCAPGGKTCHILEVEKDLVGVVAVDLEAKRLVRVRENLARLGLSAEL 297
           LL    G +V D C APGGKT  ++        V AVD    RL R+R+NLARLGL+A +
Sbjct: 251 LLGKVDGLKVADLCAAPGGKTAQLVAAGAQ---VTAVDRSGARLTRLRDNLARLGLAATV 307

Query: 298 IAADGRDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDA 357
           +  D    A  + G PF  +LLDAPCSATG +RRHPDI ++++P DI  LA LQ  LLD 
Sbjct: 308 VEGD----AATFAGGPFDAVLLDAPCSATGTLRRHPDIAVSKRPSDIPTLATLQARLLDH 363

Query: 358 LWPTLEVGGILLYATCSTLPTENTEVIEAFLA----------RTSGARELDLATT--AGI 405
               ++ GG+++Y+TCS  P E    +E  LA          R      LDL  T    +
Sbjct: 364 AIDLVKPGGLVVYSTCSLEPEEGEAQVERLLAARKDVEREPLRAGEVDGLDLFITPQGDV 423

Query: 406 R--QPHGRQLLAQEGGHDGFYYAKL 428
           R    H  +  A+  G DGF+ A+L
Sbjct: 424 RTLPSHWMRGEAERSGLDGFFAARL 448